Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05313 and RBAM_032130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence dna-align/BSNT_05313___hisG.1.9828.seq
# -bsequence dna-align/RBAM_032130___hisG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05313___hisG-RBAM_032130___hisG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05313___hisG-RBAM_032130___hisG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05313___hisG
# 2: RBAM_032130___hisG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 644
# Identity: 493/644 (76.6%)
# Similarity: 493/644 (76.6%)
# Gaps: 22/644 ( 3.4%)
# Score: 1928.0
#
#
#=======================================
BSNT_05313___ 1 ------------------ATGGCGATGCCAAAGGGCCGGATATTTGAAGA 32
|||||.||||||||.||.||||||||.|||||
RBAM_032130__ 1 ATGGGTAAGGTACTCACAATGGCAATGCCAAAAGGACGGATATTCGAAGA 50
BSNT_05313___ 33 AGCGGCAGGGCTGCTGAGGCAGGCAGGCTACAGGCTCCCTGAGGAGTTTG 82
||||||.|||.|||||.|||||||.||.||||||||.||.||||||||||
RBAM_032130__ 51 AGCGGCCGGGTTGCTGCGGCAGGCCGGGTACAGGCTGCCCGAGGAGTTTG 100
BSNT_05313___ 83 AAGATTCGAGAAAACTGATCATCGATGTGCCGGAGGAAAATCTTCGTTTC 132
||||.||||||||.||||||||.||.||.||.||.||||||||.||.||.
RBAM_032130__ 101 AAGAATCGAGAAAGCTGATCATTGACGTTCCTGAAGAAAATCTCCGCTTT 150
BSNT_05313___ 133 ATATTAGCAAAGCCGATGGACGTAACCACGTATGTGGAGCATGGCGTGGC 182
||..|.||||||||||||||.||.||.||.|||||.|||||||||||.||
RBAM_032130__ 151 ATTCTGGCAAAGCCGATGGATGTGACGACTTATGTCGAGCATGGCGTCGC 200
BSNT_05313___ 183 AGACGTCGGAATTGCGGGCAAGGATGTCATGCTGGAGGAGGAACGCGATG 232
.||.|.|||.|||||.||.||||||||||||||.|||||.||.||.||.|
RBAM_032130__ 201 TGATGCCGGTATTGCCGGAAAGGATGTCATGCTTGAGGAAGAGCGTGACG 250
BSNT_05313___ 233 TGTATGAGGTACTGGATTTAAAAATCAGCAAATGCCACTTAGCTGTCGCC 282
||||||||||.||.|||.|.|||||||||||||||||..|.||.||.||.
RBAM_032130__ 251 TGTATGAGGTGCTCGATCTGAAAATCAGCAAATGCCATCTCGCCGTTGCG 300
BSNT_05313___ 283 GGACTTCC--GAATACAGACTGGAGCGGCGTAGCGCCAAGAATCGCGACA 330
||.||||| || .|.||.||||.|||.||.||.||.||.||.|||||.
RBAM_032130__ 301 GGGCTTCCCGGA--GCGGATTGGAACGGAGTCGCCCCGAGGATTGCGACG 348
BSNT_05313___ 331 AAGTATCCGAATGTGGCTTCCAGTTATTTCAGAGAGCAGGGAGAACAAGT 380
||.|||||||||||.||.||.||||||||||||||||||||.||.||.||
RBAM_032130__ 349 AAATATCCGAATGTTGCGTCAAGTTATTTCAGAGAGCAGGGCGAGCAGGT 398
BSNT_05313___ 381 CGAGATCATTAAGCTCAACGGTTCAATTGAACTGGCTCCGCTCATTGGGC 430
.||.|||||||||||.||||||||.||||||.||||.||..|.||.||||
RBAM_032130__ 399 GGAAATCATTAAGCTGAACGGTTCGATTGAATTGGCGCCTTTAATCGGGC 448
BSNT_05313___ 431 TTGCAGATCGGATAGTGGACATTGTTTCCACAGGACAGACGCTGAAAGAA 480
||||.||..|.||.||.||.||.||.||.||.||.|.|||..|.||||||
RBAM_032130__ 449 TTGCTGACAGAATCGTAGATATCGTATCAACCGGGCGGACATTAAAAGAA 498
BSNT_05313___ 481 AATGGGCTTGTTGAAACGGAGCACATTTGTGACATTACGTCTCGCTTTAT 530
||.||.||.||||||.|.||.||.|||||||||||.||.||.||.|||||
RBAM_032130__ 499 AACGGTCTCGTTGAATCAGAACATATTTGTGACATCACATCGCGTTTTAT 548
BSNT_05313___ 531 TGTCAACCCGGTAAGCTATCGCATGAAAGACGATGTGATTGACGAAATGG 580
.|||||.|||||.|||||.||.|||||.||.|||||.||.||||||||||
RBAM_032130__ 549 CGTCAATCCGGTCAGCTACCGTATGAAGGATGATGTAATCGACGAAATGG 598
BSNT_05313___ 581 CATCCCGCCTATCTCTCGTTGTGGAAGGAGAGACGGCAAAATGA 624
|..||.|..|..|....||||||||||||||.||||||.|||||
RBAM_032130__ 599 CGGCCAGGTTGGCCAGGGTTGTGGAAGGAGAAACGGCACAATGA 642
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