Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05308 and RBAM_032100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence pep-align/BSNT_05308___hisH.1.9828.seq
# -bsequence pep-align/RBAM_032100___hisH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05308___hisH-RBAM_032100___hisH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05308___hisH-RBAM_032100___hisH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05308___hisH
# 2: RBAM_032100___hisH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 171/212 (80.7%)
# Similarity: 190/212 (89.6%)
# Gaps: 0/212 ( 0.0%)
# Score: 901.0
#
#
#=======================================
BSNT_05308___ 1 MIGVIDYGMGNLYSVSKALERVGVPYFVSEKPEELKEADAFILPGVGSFG 50
||||||||||||:|||||||||||||.||::||||::||||||||||||.
RBAM_032100__ 1 MIGVIDYGMGNLFSVSKALERVGVPYVVSDRPEELEKADAFILPGVGSFS 50
BSNT_05308___ 51 DAMDNLRYTKLDQLIHDMVSEGRLLLGICLGMQLLFEESEENGTASGLGL 100
|||||||..||||.||.||.||:|||||||||||:||||.|||:|.||||
RBAM_032100__ 51 DAMDNLRRAKLDQFIHRMVDEGKLLLGICLGMQLIFEESTENGSAKGLGL 100
BSNT_05308___ 101 LKGKAVRLKAEDEKGNKLKVPHMGWNRLSFHNESPLLTKTEQGYAYFVHS 150
|.|||||||..|.:||||||||||||||:||..||||::.|:|:.|||||
RBAM_032100__ 101 LAGKAVRLKDRDAEGNKLKVPHMGWNRLTFHQTSPLLSEAEEGFVYFVHS 150
BSNT_05308___ 151 YYIDGMEEDSLLASTDYGVRVPAVVGKRNVFGAQFHPEKSSTVGMSILTQ 200
|||||||:..||||.:||||||||||||||||||||||||.|.||:||||
RBAM_032100__ 151 YYIDGMEDGDLLASAEYGVRVPAVVGKRNVFGAQFHPEKSGTAGMAILTQ 200
BSNT_05308___ 201 FTKMAAKQKVKK 212
||||||:|:|||
RBAM_032100__ 201 FTKMAAEQQVKK 212
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