Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05307 and RBAM_032090

See DNA alignment / Visit BSNT_05307 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:44
# Commandline: needle
#    -asequence pep-align/BSNT_05307___hisA.1.9828.seq
#    -bsequence pep-align/RBAM_032090___hisA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05307___hisA-RBAM_032090___hisA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05307___hisA-RBAM_032090___hisA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05307___hisA
# 2: RBAM_032090___hisA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     196/245 (80.0%)
# Similarity:   221/245 (90.2%)
# Gaps:           0/245 ( 0.0%)
# Score: 1003.0
# 
#
#=======================================

BSNT_05307___      1 MSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFAKEGAEWI     50
                     |:||||||||||||||||||:||||.|||||||||.|||..||:||||||
RBAM_032090__      1 MNAFTLYPAIDMRNGKCVRLIQGDYGKETIYGDSPLDMAAQFAQEGAEWI     50

BSNT_05307___     51 HLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSEKDVYEYLSAGV    100
                     |||||||||.|::||||||::||::|:.|||||||||||.|||.|||.||
RBAM_032090__     51 HLVDLDGAKAGRKVNDRHVLDIARQLDAKVEIGGGIRSEADVYGYLSQGV    100

BSNT_05307___    101 DRVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLK    150
                     |||||||||||:|.|||.||||||.|||||||||||:||||||||||:::
RBAM_032090__    101 DRVILGSSAVSDPAFVKSMLKQYGGKIAIGLDARNGYVSTEGWLETSSVR    150

BSNT_05307___    151 ATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASG    200
                     |.:||:|||.||||.||||||||||||||||::|||:|||.|||:|||||
RBAM_032090__    151 AADLGRELAAEGAETFIFTDIATDGMLSGPNIESTVQLAKATGKTVIASG    200

BSNT_05307___    201 GVSSVTDLEALARYEADGVSGAIIGKALYTNQFTLSEALERVKRK    245
                     |||||.||:||||::..|||||||||||||.||||:|||..||..
RBAM_032090__    201 GVSSVADLKALARFKDAGVSGAIIGKALYTKQFTLAEALSGVKDA    245


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