Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05300 and RBAM_032060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence pep-align/BSNT_05300___yvcC.1.9828.seq
# -bsequence pep-align/RBAM_032060___yvcC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05300___yvcC-RBAM_032060___yvcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05300___yvcC-RBAM_032060___yvcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05300___yvcC
# 2: RBAM_032060___yvcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 589
# Identity: 505/589 (85.7%)
# Similarity: 550/589 (93.4%)
# Gaps: 0/589 ( 0.0%)
# Score: 2530.0
#
#
#=======================================
BSNT_05300___ 1 MPNQKQKSKSKLKPFFALVRRTNPSYGKLAFALALSVVTTLVSLLIPLLT 50
|||::.|.|.|...||:||::|.||||.|||||:||:|||||||||||||
RBAM_032060__ 1 MPNKQPKPKGKFSSFFSLVKKTKPSYGMLAFALSLSIVTTLVSLLIPLLT 50
BSNT_05300___ 51 KQLVDDFSMSNLSGTQIGLIALVFFVQAGLSAYATYALNYNGQKIISGLR 100
|||||.||||:|||.|||:||.||.|||.|||||||||||:|||||||||
RBAM_032060__ 51 KQLVDGFSMSSLSGVQIGIIAAVFIVQAALSAYATYALNYSGQKIISGLR 100
BSNT_05300___ 101 ELLWKKLIKLPVSYFDTNASGETVSRVTNDTMVVKELITTHISGFITGII 150
:|||:|||||||||||.||:|||:|||||||||||||||.:|||||||||
RBAM_032060__ 101 DLLWQKLIKLPVSYFDKNATGETISRVTNDTMVVKELITNNISGFITGII 150
BSNT_05300___ 151 SVIGSLTILFIMNWKLTLLVLVVVPLAALILVPIGRKMFSISRETQDETA 200
||||||||||.||||||||||:||||||:||||||||||.||||||||||
RBAM_032060__ 151 SVIGSLTILFFMNWKLTLLVLIVVPLAAVILVPIGRKMFKISRETQDETA 200
BSNT_05300___ 201 RFTGLLNQILPEIRLVKASNAEDVEYGRGKMGISSLFKLGVREAKVQSLV 250
|||||||.||||||||||||||:.||||||.||.:|||||:|||||||||
RBAM_032060__ 201 RFTGLLNHILPEIRLVKASNAEEAEYGRGKAGIMALFKLGLREAKVQSLV 250
BSNT_05300___ 251 GPLISLVLMAALVAVIGYGGMQVSSGELTAGALVAFILYLFQIIMPMGQI 300
||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_032060__ 251 GPLITLVLMAALVAVIGYGGMQVSSGELTAGALVAFILYLFQIIMPMGQI 300
BSNT_05300___ 301 TTFFTQLQKSIGATERMIEILAEEEEDTVTGKQIENAHLPIQLDRVSFGY 350
|:||||||||:|||||||.||||:|||..|||.||||..||:|::|||||
RBAM_032060__ 301 TSFFTQLQKSVGATERMIHILAEKEEDIQTGKAIENADQPIKLEQVSFGY 350
BSNT_05300___ 351 KPDQLILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGSIRL 400
|.||.|||:::|.||||||||||||||||||||||||||||:||||||.|
RBAM_032060__ 351 KTDQTILKDITATIEAGKVTAIVGPSGGGKTTLFKLLERFYNPTAGSILL 400
BSNT_05300___ 401 GDEPIDTYSLESWREHIGYVSQESPLMSGTIRENICYGLERDVTDAEIEK 450
|:||||.|||||||||||||||||||||||||:||||||:|:|||.|:.:
RBAM_032060__ 401 GNEPIDAYSLESWREHIGYVSQESPLMSGTIRDNICYGLKREVTDEELRQ 450
BSNT_05300___ 451 AAEMAYALNFIKELPNQFDTEVGERGIMLSGGQRQRIAIARALLRNPSIL 500
||:|||||.||::||.:|:|||||||||||||||||||||||||||||||
RBAM_032060__ 451 AADMAYALQFIEDLPKKFETEVGERGIMLSGGQRQRIAIARALLRNPSIL 500
BSNT_05300___ 501 MLDEATSSLDSQSEKSVQQALEVLMEGRTTIVIAHRLSTVVDADQLLFVE 550
|||||||||||||||.|||||||||:||||||||||||||||||||||||
RBAM_032060__ 501 MLDEATSSLDSQSEKWVQQALEVLMKGRTTIVIAHRLSTVVDADQLLFVE 550
BSNT_05300___ 551 KGEITGRGTHHELMASHGLYRDFAEQQLKMNADLENKAG 589
:||||||||||||||||.|||||||||||:||||||||.
RBAM_032060__ 551 QGEITGRGTHHELMASHSLYRDFAEQQLKLNADLENKAV 589
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