Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05300 and RBAM_032060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence dna-align/BSNT_05300___yvcC.1.9828.seq
# -bsequence dna-align/RBAM_032060___yvcC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05300___yvcC-RBAM_032060___yvcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05300___yvcC-RBAM_032060___yvcC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05300___yvcC
# 2: RBAM_032060___yvcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1792
# Identity: 1363/1792 (76.1%)
# Similarity: 1363/1792 (76.1%)
# Gaps: 44/1792 ( 2.5%)
# Score: 5139.0
#
#
#=======================================
BSNT_05300___ 1 ATGCC----AAACCAGAAACAAAAATCTAAAAGTAAATTGAAACCCTTTT 46
||||| |||| |||.||||.|||||.|.|||||.|...|.||.|
RBAM_032060__ 1 ATGCCGAATAAAC----AACCAAAACCTAAAGGGAAATTCAGCTCATTCT 46
BSNT_05300___ 47 TTGCCTTAGTAAGACGTACCAATCCTTCTTATGGAAAGCTCGCCTTTGCG 96
||.|.|||||.|.|...||.||.||.||.||.||.|.|||.|||||.|||
RBAM_032060__ 47 TTTCATTAGTCAAAAAAACAAAACCATCATACGGTATGCTGGCCTTCGCG 96
BSNT_05300___ 97 CTTGCCCTCAGTGTTGTAACCACACTGGTCAGCCTGCTCATTCCATTATT 146
||..|.||||||.||||.||.||.||.|||||||||||.|||||..||||
RBAM_032060__ 97 CTGTCTCTCAGTATTGTGACAACGCTCGTCAGCCTGCTGATTCCGCTATT 146
BSNT_05300___ 147 AACGAAGCAGCTTGTCGATGATTTTTCTATGTCAAATCTGTCAGGCACGC 196
.||.||||||||.||.||.|..|||||.|||||....|||||||||..||
RBAM_032060__ 147 GACAAAGCAGCTCGTTGACGGCTTTTCCATGTCGTCGCTGTCAGGCGTGC 196
BSNT_05300___ 197 AAATCGGTTTGATCGC-GCTGGTGTTTTTCGTTCAGGCGGGTTTAAGCGC 245
|||||||..|.||||| || .||||||.||||.|||||.|..||||||||
RBAM_032060__ 197 AAATCGGAATCATCGCAGC-CGTGTTTATCGTACAGGCCGCATTAAGCGC 245
BSNT_05300___ 246 TTATGCCACCTATGCGCTTAACTATAATGGACAAAAAATCATTTCCGGAC 295
.||.||||||||.||.||.|||||.|..||.||.||||||||.||.||||
RBAM_032060__ 246 CTACGCCACCTACGCCCTGAACTACAGCGGCCAGAAAATCATCTCGGGAC 295
BSNT_05300___ 296 TGCGGGAGTTATTATGGAAGAAATTAATTAAGCTTCCTGTCTCTTATTTC 345
||||.||.||.||.|||.|||||||||||||.||.||.|||||||||||.
RBAM_032060__ 296 TGCGTGATTTGTTGTGGCAGAAATTAATTAAACTGCCCGTCTCTTATTTT 345
BSNT_05300___ 346 GATACAAATGCTTCCGGAGAAACAGTCAGCCGTGTAACGAATGATACGAT 395
||.|.|||.||..|.||||||||..||||||||||.||.|||||.||.||
RBAM_032060__ 346 GACAAAAACGCCACGGGAGAAACGATCAGCCGTGTCACCAATGACACAAT 395
BSNT_05300___ 396 GGTGGTCAAAGAACTGATTACAACCCACATCAGCGGGTTTATTACAGGCA 445
||||||.|||||.|||||.||||.|.|.||||||||.||||||||.||.|
RBAM_032060__ 396 GGTGGTAAAAGAGCTGATCACAAACAATATCAGCGGATTTATTACCGGAA 445
BSNT_05300___ 446 TCATTTCTGTCATTGGATCATTGACAATCTTGTTTATTATGAACTGGAAG 495
|||||||.||.||.||.|||.||||.|||||.|||.|.||||||||||||
RBAM_032060__ 446 TCATTTCCGTTATCGGGTCACTGACGATCTTATTTTTCATGAACTGGAAG 495
BSNT_05300___ 496 CTGACACTGCTTGTGTTAGTGGTTGTTCCGCTGGCCGCTCTTATTTTGGT 545
||.|||.||||.|||.|..|.||.||.||||||||.||..|.|||||.||
RBAM_032060__ 496 CTCACATTGCTCGTGCTGATCGTCGTGCCGCTGGCTGCGGTGATTTTAGT 545
BSNT_05300___ 546 GCCGATTGGACGGAAAATGTTCTCCATTTCACGGGAAACGCAAGATGAAA 595
||||||.||.|||||||||||....|||||.||||||||.||.|||||||
RBAM_032060__ 546 GCCGATCGGCCGGAAAATGTTTAAAATTTCTCGGGAAACACAGGATGAAA 595
BSNT_05300___ 596 CGGCTCGTTTTACAGGCCTGCTGAATCAAATTCTCCCGGAAATCAGACTC 645
||||..|.||.||.||..|..|.||.||.||.||||||||||||||.||.
RBAM_032060__ 596 CGGCGAGATTCACCGGATTATTAAACCACATCCTCCCGGAAATCAGGCTT 645
BSNT_05300___ 646 GTCAAGGCTTCAAATGCGGAGGATGTCGAATATGGTCGCGGGAA------ 689
||.||.||.|||||.||.||.||.|..|||||.||.|||||.||
RBAM_032060__ 646 GTAAAAGCGTCAAACGCTGAAGAAGCGGAATACGGACGCGGAAAAGCAGG 695
BSNT_05300___ 690 ---GATGGGGATTTCCTCATTATTTAAGCTTGGCGTTCGTGAAGCCAAGG 736
.|||| ||.|.|||||.||.||..|.||||||||.||||
RBAM_032060__ 696 CATCATGG---------CACTCTTTAAACTCGGGCTGCGTGAAGCGAAGG 736
BSNT_05300___ 737 TTCAATCGCTTGTCGGCCCGCTTATTTCACTCGTGTTAATGGCAGCGCTT 786
|.||.|||||.||.||||||||||||.||||.||.||||||||.|||||.
RBAM_032060__ 737 TGCAGTCGCTCGTAGGCCCGCTTATTACACTTGTATTAATGGCGGCGCTG 786
BSNT_05300___ 787 GTCGCAGTGATCGGATATGGCGGCATGCAGGTCTCATCAGGCGAGCTCAC 836
|||||.||.|||||.||.|||||.||||||||.|||||.||.||..|.||
RBAM_032060__ 787 GTCGCTGTCATCGGGTACGGCGGGATGCAGGTGTCATCCGGTGAATTGAC 836
BSNT_05300___ 837 AGCCGGAGCGCTCGTGGCTTTTATTTTATATTTATTTCAAATTATTATGC 886
||||||.||.|||||.||.|||||..|.|||||.|||||.||.|||||||
RBAM_032060__ 837 AGCCGGCGCACTCGTTGCCTTTATCCTGTATTTGTTTCAGATCATTATGC 886
BSNT_05300___ 887 CGATGGGCCAGATTACAACGTTTTTCACACAGCTGCAAAAATCAATCGGT 936
|||||||||||||.||..|.||||||||||||||.||||||||..||||.
RBAM_032060__ 887 CGATGGGCCAGATCACTTCATTTTTCACACAGCTTCAAAAATCCGTCGGC 936
BSNT_05300___ 937 GCAACAGAACGAATGATTGAGATTTTGGCAGAGGAAGAGGAAGATA--CA 984
|||||.|||||.||||||.|.|||.|.|||||..||||.||||||| ||
RBAM_032060__ 937 GCAACGGAACGGATGATTCATATTCTTGCAGAAAAAGAAGAAGATATCCA 986
BSNT_05300___ 985 GTGACAGGAAAACAAATTGAAAATGCGCATCTGCCTATCCAGCTTGATCG 1034
.||.||||||...||||||||.||..|||.|||.||..|||||||.|.
RBAM_032060__ 987 --AACCGGAAAAGCCATTGAAAACGCAGATCAGCCGATTAAGCTTGAACA 1034
BSNT_05300___ 1035 CGTGTCTTTTGGATATAAGCCTGATCAGCTGATCTTAAAAGAGGTCAGCG 1084
.||.||.||.||.||.||..|.|||||....|||||||||||..|.|..|
RBAM_032060__ 1035 AGTCTCATTCGGCTACAAAACAGATCAAACCATCTTAAAAGACATTACGG 1084
BSNT_05300___ 1085 CTGTCATTGAAGCAGGTAAAGTCACAGCGATTGTCGGTCCGAGCGGCGGG 1134
||...||||||||.||.||||||||.|||||.|||||.|||||||||||.
RBAM_032060__ 1085 CTACGATTGAAGCCGGCAAAGTCACCGCGATCGTCGGACCGAGCGGCGGC 1134
BSNT_05300___ 1135 GGGAAAACGACGCTGTTTAAGCTGCTTGAACGTTTTTATTCTCCGACTGC 1184
||.|||||.|||.|.|||||||||||||||||.||.||...|||||||||
RBAM_032060__ 1135 GGAAAAACAACGTTATTTAAGCTGCTTGAACGATTCTACAATCCGACTGC 1184
BSNT_05300___ 1185 AGGGTCCATTCGGCTGGGGGACGAGCCGATTGATACTTATTCGCTTGAAT 1234
.||...|||.|.|||.||..|.||.|||||||||.|.|||||.|||||.|
RBAM_032060__ 1185 GGGCAGCATCCTGCTCGGAAATGAACCGATTGATGCGTATTCCCTTGAGT 1234
BSNT_05300___ 1235 CATGGCGGGAGCACATCGGGTATGTATCACAGGAAAGCCCGTTAATGTCC 1284
|||||||||||||.|||||.||.||.||.||.|||||||||||||||||.
RBAM_032060__ 1235 CATGGCGGGAGCATATCGGCTACGTGTCGCAAGAAAGCCCGTTAATGTCA 1284
BSNT_05300___ 1285 GGGACAATCAGAGAAAATATTTGCTACGGGTTAGAACGTGATGTGACGGA 1334
||.||.|||.|.||.|||||.||.|||||.|||.||||.||.|||||.||
RBAM_032060__ 1285 GGCACCATCCGCGACAATATCTGTTACGGATTAAAACGCGAGGTGACTGA 1334
BSNT_05300___ 1335 TG-----CTGAGATCGAAAAAGCCGCGGAGATGGCATATGCGCT-CAATT 1378
|| ||||| ..||||.||.||.|||||.||.||.|| ||| |
RBAM_032060__ 1335 TGAGGAACTGAG-----GCAAGCGGCTGACATGGCCTACGCCCTGCAA-T 1378
BSNT_05300___ 1379 TTATAAAGGAGCTGCCGAATCAGTTTGATACAGAAGTAGGCGAACGCGGC 1428
||||..|.||..|.|||||..|.|||||.|||||.||.||.||.||.||.
RBAM_032060__ 1379 TTATTGAAGACTTACCGAAGAAATTTGAAACAGAGGTCGGTGAGCGGGGA 1428
BSNT_05300___ 1429 ATTATGCTGTCAGGCGGACAAAGGCAAAGAATCGCGATTGCGAGAGCACT 1478
||||||||||||||||||||..|.||..|.|||||.|||||.|||||.||
RBAM_032060__ 1429 ATTATGCTGTCAGGCGGACAGCGCCAGCGCATCGCCATTGCCAGAGCGCT 1478
BSNT_05300___ 1479 TCTCCGTAACCCAAGCATTCTTATGCTCGATGAAGCTACCTCAAGTCTCG 1528
.||.||.|||||.||||||||.|||||.||||||||.||.||||||||.|
RBAM_032060__ 1479 CCTTCGCAACCCGAGCATTCTGATGCTTGATGAAGCGACATCAAGTCTGG 1528
BSNT_05300___ 1529 ACAGCCAATCTGAAAAATCAGTTCAGCAGGCGCTGGAGGTGCTGATGGAA 1578
||||||||||||||||||..||.||||||||||||||.||.||.|||.||
RBAM_032060__ 1529 ACAGCCAATCTGAAAAATGGGTGCAGCAGGCGCTGGAAGTTCTAATGAAA 1578
BSNT_05300___ 1579 GGCCGCACAACGATTGTTATCGCTCACCGCCTATCTACCGTTGTAGATGC 1628
||||||||.||||||||.|||||.|||||..||||.||.|||||.|||||
RBAM_032060__ 1579 GGCCGCACCACGATTGTGATCGCCCACCGTTTATCCACGGTTGTGGATGC 1628
BSNT_05300___ 1629 GGACCAGCTTTTGTTTGTTGAAAAAGGGGAAATTACCGGTCGTGGAACAC 1678
.||.||||||.|.|||||.|||.|.||.|||||.|||||.||.||.||||
RBAM_032060__ 1629 AGATCAGCTTCTCTTTGTCGAACAGGGTGAAATCACCGGACGGGGCACAC 1678
BSNT_05300___ 1679 ACCATGAGTTAATGGCTTCCCATGGCCTTTATCGGGATTTTGCTGAACAG 1728
|||||||.||||||||.||||||...||.||.||.||||||||.||.|||
RBAM_032060__ 1679 ACCATGAATTAATGGCATCCCATTCGCTGTACCGCGATTTTGCGGAGCAG 1728
BSNT_05300___ 1729 CAGCTGAAAATGAATGCAGACTTAGAAAACAAAGCCGGGTAA 1770
||||||||..|||||||.|||||||||||||||||.|.||||
RBAM_032060__ 1729 CAGCTGAAGCTGAATGCCGACTTAGAAAACAAAGCTGTGTAA 1770
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