Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05299 and RBAM_032030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence pep-align/BSNT_05299___yvcD.1.9828.seq
# -bsequence pep-align/RBAM_032030___yvcD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05299___yvcD-RBAM_032030___yvcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05299___yvcD-RBAM_032030___yvcD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05299___yvcD
# 2: RBAM_032030___yvcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity: 367/484 (75.8%)
# Similarity: 428/484 (88.4%)
# Gaps: 0/484 ( 0.0%)
# Score: 1980.0
#
#
#=======================================
BSNT_05299___ 1 MGKHTSEHKNHAQIVQLLQDGQYFFHKGLKAYKERNLKRASKLIQRAVHL 50
|||||||.|.||||||||||||||||||||||||||||||||||||||||
RBAM_032030__ 1 MGKHTSEQKKHAQIVQLLQDGQYFFHKGLKAYKERNLKRASKLIQRAVHL 50
BSNT_05299___ 51 EPEDSEMLSQLAVIYSEMGQYQESNDLLDYIMANLEAEMPECHYFKANNF 100
||.||||||:|||||||||.||:||:|.|:|:.||:.|||||||||||||
RBAM_032030__ 51 EPNDSEMLSRLAVIYSEMGHYQQSNELFDFILVNLKEEMPECHYFKANNF 100
BSNT_05299___ 101 AHLGLFQEAYKEAAAYSDADPDGEFAEENDSLLDLLDLGDDGIEDSLYDQ 150
|||||||||||||||||||||||||:||.::|::|||.|:.|..:|||||
RBAM_032030__ 101 AHLGLFQEAYKEAAAYSDADPDGEFSEEIENLMELLDFGEAGENESLYDQ 150
BSNT_05299___ 151 DELLVKQDRAKSLLESGQLAEAVAALEEITAEYPELWSAYNNLALAYFYS 200
||||::|||||:|||||||.|||..||||||:||||||||||||||||||
RBAM_032030__ 151 DELLIRQDRAKALLESGQLHEAVVMLEEITADYPELWSAYNNLALAYFYS 200
BSNT_05299___ 201 GNVVKAKQTAYEVLSHNEGNLHALCNLLVFYYYEREDEKVAELSDQLSNV 250
|||.|||||.:|||..||||||||||||||.|||||||||.|||.:|:||
RBAM_032030__ 201 GNVTKAKQTVFEVLEKNEGNLHALCNLLVFCYYEREDEKVGELSGKLANV 250
BSNT_05299___ 251 YPMLLEQRYKLGATLALVGRYEIGYKWLKSLYKIGFEGDDTFFYWLSCSA 300
||:|.|||||||||||||||:::|||||:||||.|||||:||:|||:.||
RBAM_032030__ 251 YPILFEQRYKLGATLALVGRHDLGYKWLRSLYKSGFEGDETFYYWLAASA 300
BSNT_05299___ 301 YFTGHTDFAETIWRKVESQYPGEDRPAPWIERREALPSSVEQRLAAYYIS 350
|.||.|:||||||:|.|:::|..||||||.||:|.||:|:||||||||||
RBAM_032030__ 301 YGTGRTEFAETIWKKAEAEFPESDRPAPWAERQEPLPASLEQRLAAYYIS 350
BSNT_05299___ 351 STKGETEHLEAVIRSKRITAPFENHFVKLLLNGDSGAADVSEDALFAYQT 400
|.:||...||.|:.:||..:|||..||||||:|:.||:.||.||||.|:|
RBAM_032030__ 351 SAEGERNQLEKVLTAKRAVSPFEQDFVKLLLSGEKGASGVSGDALFTYRT 400
BSNT_05299___ 401 VKLLEQAEKEEMKTEVMSCWVFHVIQQIRAVAPLKNEKGWAAAICYIWKE 450
|||||:||.:.:||:|||||||||||.|||.|.::||:.|||||.|:|||
RBAM_032030__ 401 VKLLEKAEADSLKTDVMSCWVFHVIQHIRAAAAVQNERAWAAAIAYVWKE 450
BSNT_05299___ 451 AHGKQDTKKDTAARFGISPATLTKYMKYIDDILE 484
|:|::.|||:|||.:||:||||:||::.||||||
RBAM_032030__ 451 ANGEKTTKKETAAVYGITPATLSKYIRQIDDILE 484
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