Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05292 and RBAM_031980

See DNA alignment / Visit BSNT_05292 in genome browser / Return to Orthologue table 
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence pep-align/BSNT_05292___yvcK.1.9828.seq
#    -bsequence pep-align/RBAM_031980___yvcK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05292___yvcK-RBAM_031980___yvcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05292___yvcK-RBAM_031980___yvcK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05292___yvcK
# 2: RBAM_031980___yvcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     282/331 (85.2%)
# Similarity:   303/331 (91.5%)
# Gaps:          14/331 ( 4.2%)
# Score: 1449.0
# 
#
#=======================================

BSNT_05292___      1 MLLTGTLKREAGNKMGQKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTV     50
                                   |.:|||||||||||||||||||||||||||||||||
RBAM_031980__      1 --------------MNKKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTV     36

BSNT_05292___     51 ADDGGSSGRLRNELKIPPPGDIRNVLAALSDVEPLVEDLFQHRFNKGNDL    100
                     |||||||||||:||:||||||||||||||||||||||:|||||||||:||
RBAM_031980__     37 ADDGGSSGRLRDELQIPPPGDIRNVLAALSDVEPLVENLFQHRFNKGSDL     86

BSNT_05292___    101 TGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGKVLPAANASVVLHAE    150
                     |||||||||||||||||||||||||||||||||||:||||||.|||||||
RBAM_031980__     87 TGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGRVLPAANTSVVLHAE    136

BSNT_05292___    151 MEDGRVVSGESTIPEYGQRIKRVFLTPEQIDPLPETIDVIREADLIIIGP    200
                     ||||:|||||||||.|||||||||||||:||||||||||||:||||||||
RBAM_031980__    137 MEDGQVVSGESTIPSYGQRIKRVFLTPEKIDPLPETIDVIRQADLIIIGP    186

BSNT_05292___    201 GSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVK    250
                     ||||||||||||||||||||:||.|||||||||||||||||.|:||||||
RBAM_031980__    187 GSLYTSILPNLLVPKIGEEVVKAAAKKVYICNVMTQPGETLQYSAADHVK    236

BSNT_05292___    251 ALNQHMGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLE    300
                     |||.||...||||||:|:|:||||||.||..|.||||||::|:||:||||
RBAM_031980__    237 ALNDHMEQPFIDTILINNEEIPDEIKSKYAKELARPVDFNVEKLKSMGLE    286

BSNT_05292___    301 VIRDQIVTYKNDVIRHDTHKVASLLVDLLKE    331
                     ||||||:||||.|||||||||||||||||::
RBAM_031980__    287 VIRDQIITYKNGVIRHDTHKVASLLVDLLRD    317


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