Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05289 and RBAM_031950

See DNA alignment / Visit BSNT_05289 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence pep-align/BSNT_05289___yvcN.1.9828.seq
#    -bsequence pep-align/RBAM_031950___yvcN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05289___yvcN-RBAM_031950___yvcN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05289___yvcN-RBAM_031950___yvcN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05289___yvcN
# 2: RBAM_031950___yvcN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     152/251 (60.6%)
# Similarity:   193/251 (76.9%)
# Gaps:           3/251 ( 1.2%)
# Score: 827.0
# 
#
#=======================================

BSNT_05289___      1 MSDFLKDCFQKIGWEKDHVSFGDLPLFLKAMAYRFPFENRAVLAKENYKI     50
                     |::|||||:|.||||||.:.|.:||.||||:||||||||||||:|:.|.:
RBAM_031950__      1 MNEFLKDCYQTIGWEKDSLDFSNLPEFLKALAYRFPFENRAVLSKKEYDV     50

BSNT_05289___     51 TKEELWRRLLKDQHGGLCYDLNGFLYFVLREAGFHVKLIRGTVYAGDQEG    100
                     |||.|||.::|:.||||||||||.|||:|::|||.||||||||:   :.|
RBAM_031950__     51 TKEGLWRHMVKEPHGGLCYDLNGLLYFILKDAGFDVKLIRGTVW---KNG     97

BSNT_05289___    101 WALEGTHAAVWLSAENGDYLVDIGFGINLALQPIPLSGETVQSPVGSFRI    150
                     |||.||||||.|||...:|:.|.|||:|||:||:|:||:...|..|:||:
RBAM_031950__     98 WALPGTHAAVLLSAGGNEYIADAGFGLNLAMQPVPMSGDETVSAAGAFRV    147

BSNT_05289___    151 KREETEKGSHVLLMDKGEGWQIGYAFTLEESDLGDLDNMKDIIHSHEKSP    200
                     :.||||.|:::|.|:||:|||.||||:|||.|..||.:||..|..||:||
RBAM_031950__    148 RIEETEFGTYLLEMNKGDGWQTGYAFSLEEIDEKDLKSMKQTIFEHERSP    197

BSNT_05289___    201 FNKSPLASKLTPSGRMVMSERHFTIHENGSDIQKSDIGPSEFEEKLNTHF    250
                     |||..||||.||.|.||:|||:.||.::....:.|.|..||||||...||
RBAM_031950__    198 FNKRLLASKRTPEGHMVLSERNITIKKHDGTAENSRIDRSEFEEKFTAHF    247

BSNT_05289___    251 L    251
                     :
RBAM_031950__    248 I    248


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