Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05282 and RBAM_031930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence pep-align/BSNT_05282___yvcT.1.9828.seq
# -bsequence pep-align/RBAM_031930___yvcT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05282___yvcT-RBAM_031930___yvcT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05282___yvcT-RBAM_031930___yvcT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05282___yvcT
# 2: RBAM_031930___yvcT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity: 260/324 (80.2%)
# Similarity: 299/324 (92.3%)
# Gaps: 3/324 ( 0.9%)
# Score: 1393.0
#
#
#=======================================
BSNT_05282___ 1 MKPFVFITKPIPEEIEAFIGEHCRYEVWQEDTLPSDVLFEKLKEAEGLLT 50
|||:|||.||||.|:|..|||||||::|:|||:|.:.|:||:|:||||||
RBAM_031930__ 1 MKPYVFIAKPIPPEVEQMIGEHCRYDIWKEDTIPKEELYEKMKDAEGLLT 50
BSNT_05282___ 51 SGTSGPSINRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVIGTHTPYT 100
||| :|:.:||:||||||||||.|||||||:||.||.|||:|||||||
RBAM_031930__ 51 SGT---AIDSDLLDHAPKLKVVSNNSVGYDNFNIEEMKRRGVVGTHTPYT 97
BSNT_05282___ 101 LDDTVADLAFSLILSSARRVAELDRFVRAGKWGTVEEEALFGIDVHHQTL 150
||||||||||||||||||||||||||||||||||||||:|||:|||||||
RBAM_031930__ 98 LDDTVADLAFSLILSSARRVAELDRFVRAGKWGTVEEESLFGMDVHHQTL 147
BSNT_05282___ 151 GIIGMGRIGEQAARRAKFGFDMEVLYHNRHRKQETEDSIGVKYAELDTLL 200
|||||||||||||:||||||||:|||:||.||.:.|..:||.||:|||||
RBAM_031930__ 148 GIIGMGRIGEQAAKRAKFGFDMDVLYYNRSRKPDAEKELGVTYADLDTLL 197
BSNT_05282___ 201 ERSDFILLITPLTDETYHMIGEREFKLMKDSAIFVNISRGKTVDEKALIR 250
:.|||:|||||||||||||:||||||||||:|.|||||||||||||||||
RBAM_031930__ 198 KTSDFVLLITPLTDETYHMMGEREFKLMKDTACFVNISRGKTVDEKALIR 247
BSNT_05282___ 251 ALQEGWIRGAGLDVYEKEPVSQDNPLLQLDNVTLLPHIGSATAKVRFNMC 300
|||||||:||||||:||||:::|||||||:||||||||||||||:|.||.
RBAM_031930__ 248 ALQEGWIKGAGLDVFEKEPIAEDNPLLQLENVTLLPHIGSATAKIRLNMF 297
BSNT_05282___ 301 KQAAENMIAAIQGQTPKNLTREFQ 324
||||:|||.|:.|:||||||:|||
RBAM_031930__ 298 KQAAQNMIDAVYGKTPKNLTKEFQ 321
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