Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05259 and RBAM_031850
See
DNA alignment /
Visit
BSNT_05259 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence pep-align/BSNT_05259___clpP.1.9828.seq
# -bsequence pep-align/RBAM_031850___clpP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05259___clpP-RBAM_031850___clpP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05259___clpP-RBAM_031850___clpP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05259___clpP
# 2: RBAM_031850___clpP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 198
# Identity: 190/198 (96.0%)
# Similarity: 196/198 (99.0%)
# Gaps: 1/198 ( 0.5%)
# Score: 944.0
#
#
#=======================================
BSNT_05259___ 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLF 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031850__ 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLF 50
BSNT_05259___ 51 LAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMG 100
|.||||||:||:||||||||||||||||||||||||||||||||||||||
RBAM_031850__ 51 LEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMG 100
BSNT_05259___ 101 AFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKL 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031850__ 101 AFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKL 150
BSNT_05259___ 151 NKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILT-HTEDKK 197
|||||||||||||||||||||||||||:||||||||||:|| :|||:|
RBAM_031850__ 151 NKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK 198
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.