Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05197 and RBAM_031730

See DNA alignment / Visit BSNT_05197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:41
# Commandline: needle
#    -asequence pep-align/BSNT_05197___padC.1.9828.seq
#    -bsequence pep-align/RBAM_031730___padC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05197___padC-RBAM_031730___padC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05197___padC-RBAM_031730___padC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05197___padC
# 2: RBAM_031730___padC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:     148/162 (91.4%)
# Similarity:   157/162 (96.9%)
# Gaps:           1/162 ( 0.6%)
# Score: 830.0
# 
#
#=======================================

BSNT_05197___      1 MENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNI     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
RBAM_031730__      1 MENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVGGRWVRDQEVNI     50

BSNT_05197___     51 VKLTEGVYKVSWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHEHPEITVC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031730__     51 VKLTEGVYKVSWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHEHPEITVC    100

BSNT_05197___    101 YQNDHIDLMKESREKYETYPKYVVPEFAEITFLKNEGVDNEEVISKAPYE    150
                     ||||:||:||||||||||||||||||||:||:|.|.|::||.:||:||||
RBAM_031730__    101 YQNDYIDVMKESREKYETYPKYVVPEFADITYLNNAGINNEALISEAPYE    150

BSNT_05197___    151 GMTDDIRAGRL-    161
                     |||||||||:| 
RBAM_031730__    151 GMTDDIRAGKLK    162


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.