Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05197 and RBAM_031730
See
Amino acid alignment /
Visit
BSNT_05197 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05197___padC.1.9828.seq
# -bsequence dna-align/RBAM_031730___padC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05197___padC-RBAM_031730___padC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05197___padC-RBAM_031730___padC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05197___padC
# 2: RBAM_031730___padC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 415/490 (84.7%)
# Similarity: 415/490 (84.7%)
# Gaps: 5/490 ( 1.0%)
# Score: 1775.0
#
#
#=======================================
BSNT_05197___ 1 ATGGAAAACTTTATCGGAAGCCACATGATTTATACGTATGAAAACGGCTG 50
|||||||||||||||||||||||.||||||||.|||||||||||||||||
RBAM_031730__ 1 ATGGAAAACTTTATCGGAAGCCATATGATTTACACGTATGAAAACGGCTG 50
BSNT_05197___ 51 GGAATACGAGATTTATATTAAAAACGACCATACAATTGATTATAGAATTC 100
|||.||.||.||.|||||||||||.||.|||||.||.||.|||.|.||||
RBAM_031730__ 51 GGAGTATGAAATCTATATTAAAAATGATCATACCATCGACTATCGGATTC 100
BSNT_05197___ 101 ATAGCGGAATGGTTGCCGGACGCTGGGTTCGGGATCAGGAAGTGAATATT 150
|||||||||||||.|.|||.||||||||.||.|||||||||||||||||.
RBAM_031730__ 101 ATAGCGGAATGGTGGGCGGCCGCTGGGTGCGCGATCAGGAAGTGAATATC 150
BSNT_05197___ 151 GTCAAACTGACAGAAGGCGTATATAAAGTGTCTTGGACAGAGCCGACTGG 200
|||||||||||||||||||||||.||||||||.|||||.||.|||||.||
RBAM_031730__ 151 GTCAAACTGACAGAAGGCGTATACAAAGTGTCATGGACTGAACCGACAGG 200
BSNT_05197___ 201 CACGGATGTTTCATTAAACTTTATGCCAAATGAAAAACGCATGCACGGCA 250
|||.||||||||.||||||||||||||.|||||||||||.||||||||.|
RBAM_031730__ 201 CACAGATGTTTCCTTAAACTTTATGCCGAATGAAAAACGGATGCACGGAA 250
BSNT_05197___ 251 TTATTTTCTTCCCGAAATGGGTGCATGAACATCCTGAAATTACGGTTTGC 300
||||||||||||||||||||||||||||.|||||.|||||.|||||.|||
RBAM_031730__ 251 TTATTTTCTTCCCGAAATGGGTGCATGAGCATCCGGAAATCACGGTGTGC 300
BSNT_05197___ 301 TACCAAAATGACCACATTGATTTGATGAAAGAATCCCGCGAAAAATATGA 350
|||||||||||..|||||||..||||||||||.||.||.||.||||||||
RBAM_031730__ 301 TACCAAAATGATTACATTGACGTGATGAAAGAGTCACGTGAGAAATATGA 350
BSNT_05197___ 351 AACGTATCCAAAATACGTTGTACCTGAATTTGCGGAAATTACATTTCTGA 400
||||||.||.|||||.||.||.||.||.||||||||.|||||.|.|||.|
RBAM_031730__ 351 AACGTACCCGAAATATGTCGTTCCCGAGTTTGCGGATATTACGTATCTCA 400
BSNT_05197___ 401 AAAATGAAGGAGTCGACAACGAAGAAGTGATTTC-GAAGGCTCCTTATGA 449
|.||||..|||.||.|.|||||||.|.||||||| ||| ||.||.||.||
RBAM_031730__ 401 ACAATGCGGGAATCAATAACGAAGCACTGATTTCAGAA-GCGCCGTACGA 449
BSNT_05197___ 450 GGGAATGACAGACGATATTCGCGCGGGAAGATTATAA--- 486
.||||||||.||.|||||.||.|||||||.||||.||
RBAM_031730__ 450 AGGAATGACCGATGATATCCGTGCGGGAAAATTAAAATAA 489
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.