Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06252 and RBAM_031700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence pep-align/BSNT_06252___yyaP.1.9828.seq
# -bsequence pep-align/RBAM_031700___ywjB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06252___yyaP-RBAM_031700___ywjB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06252___yyaP-RBAM_031700___ywjB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06252___yyaP
# 2: RBAM_031700___ywjB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 59/191 (30.9%)
# Similarity: 92/191 (48.2%)
# Gaps: 18/191 ( 9.4%)
# Score: 215.0
#
#
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BSNT_06252___ 1 MTNNLKQRRIILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTD---FLNQI 47
|:. ||:::...||:.||::..:|..:||.|.......|| |...:
RBAM_031700__ 1 MSG---QRKLVFYGAVSADGYLARENHSLDWLIGTEGEDGTDYEAFYESV 47
BSNT_06252___ 48 DTILYSRKSYDLWGQYIPKDEDPDTEKELWKLVHSKKKYVFSRTQNEIDN 97
|||:..||:|:.....:| :|.|...||. ||||||......
RBAM_031700__ 48 DTIIMGRKTYEDILVLLP-EEFPYKGKEC---------YVFSRTLTGRTE 87
BSNT_06252___ 98 QAIFINDNILEEVNKLKKKSGKDIWLYGGASLITTFINLGLVDEFRLSIH 147
...||::...:.:..||::.||.||:.||:.|:...:...|||||.:.|.
RBAM_031700__ 88 HVRFIHEEPADFIKALKRREGKRIWIVGGSDLLHPVLEEKLVDEFIIQIA 137
BSNT_06252___ 148 PVVLGEGKPLFIDVKQRINLKMVNTRTFSSGVVQIVYHWNG 188
||:||.|..||....:...||:.:.|.:.. ..::.|...
RBAM_031700__ 138 PVLLGRGISLFKPGDRETGLKLTDVRRYKQ-FAELHYEVR- 176
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