Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05195 and RBAM_031690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence pep-align/BSNT_05195___pnbA.1.9828.seq
# -bsequence pep-align/RBAM_031690___pnbA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05195___pnbA-RBAM_031690___pnbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05195___pnbA-RBAM_031690___pnbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05195___pnbA
# 2: RBAM_031690___pnbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 306/490 (62.4%)
# Similarity: 374/490 (76.3%)
# Gaps: 9/490 ( 1.8%)
# Score: 1651.0
#
#
#=======================================
BSNT_05195___ 1 MTHQIVTTQYGKVKGTTENSVHKWKGIPYAKPPVGQWRFKAPEPPEVWED 50
||...|.|:.|.:|||.......||||||||||||:.||||||||..|:.
RBAM_031690__ 1 MTKLTVQTRCGALKGTAGRGARTWKGIPYAKPPVGELRFKAPEPPAPWDG 50
BSNT_05195___ 51 VLDATAYGPICPQPSDLLSLSYT-ELPRQSEDCLFVNVFAPDTPSQNLPV 99
|..|.::||:||||.|:||:|:: ::|.||||||::||||||:..:..||
RBAM_031690__ 51 VKHADSFGPVCPQPDDMLSISFSGDVPPQSEDCLYLNVFAPDSEGEKKPV 100
BSNT_05195___ 100 MVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSF 149
||||||||||||||||||||||.|||.|:||||||||||||||||||||.
RBAM_031690__ 101 MVWIHGGAFYLGAGSEPLYDGSALAADGDVIVVTLNYRLGPFGFLHLSSI 150
BSNT_05195___ 150 DEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALL 199
.:.||.|:|||||.|||:||::|||.|||||||||:|||||||||||||:
RBAM_031690__ 151 HDTYSANIGLLDQIAALRWVKDNISEFGGDPDNVTIFGESAGGMSIAALM 200
BSNT_05195___ 200 AMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVLGINESQLDQLHT 249
|||.|||||.|||:|||||.|:..:.|...|||| |:|:..|||..
RBAM_031690__ 201 AMPDAKGLFHKAILESGASHTIPADMAKDIAAAF-----IHEAGTDQLQE 245
BSNT_05195___ 250 VSAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKAIAEGAASG 299
:|..||||.||::|.:..:|||||.||||:||.|||.||.||||:|||.|
RBAM_031690__ 246 LSVNDLLKTADKVRRSLDQNIFQLLFQPAIDPATLPAEPVKAIADGAAEG 295
BSNT_05195___ 300 IPLLIGTTRDEGYLFFTPDSDVHSQETLDAALESLLGKPLAEKVADLYPR 349
||::|||.|||.|||||||:|:||::.....|...||:...|:.|||||.
RBAM_031690__ 296 IPMIIGTNRDEAYLFFTPDTDIHSEKKQQDYLHYYLGENCTEQAADLYPH 345
BSNT_05195___ 350 SLESQIHMMTDLLFWRPAVAYASAQSHYAPVWMYRFDWHPKKPPYNKAFH 399
||:.||.|||||:|||||||:|..||.:|||||||||||.:.||::||.|
RBAM_031690__ 346 SLKGQIDMMTDLIFWRPAVAFAQGQSQHAPVWMYRFDWHGETPPFHKAVH 395
BSNT_05195___ 400 ALELPFVFGNLDGLERMAKAEITDEVKQLSHTIQSAWITFAKTGNPSTEA 449
||||||||||.|.|.:..:..:.|:.:|||..|||||:.|||||||:|..
RBAM_031690__ 396 ALELPFVFGNFDSLRKTLQEPLGDDAEQLSKQIQSAWLAFAKTGNPNTSH 445
BSNT_05195___ 450 VNWPTYHEETRETLILDSEITIEKDPESEKRQKLFPPKGE 489
.|||.|..::||||:.:::..:|.||:|.||:.||..
RBAM_031690__ 446 FNWPEYDTDSRETLLFNTDTAVESDPDSAKRRILFQA--- 482
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