Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05193 and RBAM_031670

See DNA alignment / Visit BSNT_05193 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:41
# Commandline: needle
#    -asequence pep-align/BSNT_05193___yveK.1.9828.seq
#    -bsequence pep-align/RBAM_031670___epsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05193___yveK-RBAM_031670___epsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05193___yveK-RBAM_031670___epsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05193___yveK
# 2: RBAM_031670___epsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity:     153/235 (65.1%)
# Similarity:   197/235 (83.8%)
# Gaps:           1/235 ( 0.4%)
# Score: 799.0
# 
#
#=======================================

BSNT_05193___      1 MNENMSFKELYAIVRHRFVLILLITIGVTLIMGFVQFKVISPTYQASTQV     50
                     ||||||||||:.|::|||:||.::|..|||:.|::||:||||.|||||||
RBAM_031670__      1 MNENMSFKELFDIIKHRFLLIFIMTAVVTLVTGYIQFRVISPVYQASTQV     50

BSNT_05193___     51 LVHESDGEENSNLSDIQRNLQYSSTFQSIMKSTALMEEVKAELHLSESAS    100
                     |:||:.||:||||||:|.||.|::|||:||||..::|:||..|||||:||
RBAM_031670__     51 LIHETSGEKNSNLSDVQLNLHYNNTFQTIMKSPVVLEKVKQTLHLSETAS    100

BSNT_05193___    101 SLKGKVVTSSENESEIINVAVQDHDPAKAAEIANTLVNKFEKEVDERMNV    150
                     :||.|:.||||.:||||.:||||.:|.:||.|||||:..|:|||.:|||:
RBAM_031670__    101 ALKAKITTSSETDSEIITIAVQDENPKQAAAIANTLMKTFKKEVRDRMNI    150

BSNT_05193___    151 QGVHILSEAKASESPMIKPARLRNMVMAFGAAVMGGITLAFFLHFLDDTC    200
                     :||.:|||||||||||:||:|:||::||||||:|.|:||||||||||:|.
RBAM_031670__    151 KGVIVLSEAKASESPMVKPSRIRNIMMAFGAALMAGVTLAFFLHFLDETV    200

BSNT_05193___    201 KSARQLSERTGLPCLGSVPDVHKGRNRG-IKHFGE    234
                     ||.|||||:|.||.||.|.|:...:.|. .|||||
RBAM_031670__    201 KSERQLSEKTDLPVLGVVYDIKNQQTRSDEKHFGE    235


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