Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05193 and RBAM_031670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05193___yveK.1.9828.seq
# -bsequence dna-align/RBAM_031670___epsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05193___yveK-RBAM_031670___epsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05193___yveK-RBAM_031670___epsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05193___yveK
# 2: RBAM_031670___epsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 749
# Identity: 511/749 (68.2%)
# Similarity: 511/749 (68.2%)
# Gaps: 85/749 (11.3%)
# Score: 1653.5
#
#
#=======================================
BSNT_05193___ 1 ATGAATGAGAATATGAGTTTCAAAGAATTATATGCGATTGTCAGACACAG 50
||||||||||||||||||||.||||||||||.||..|||.|.|.||||||
RBAM_031670__ 1 ATGAATGAGAATATGAGTTTTAAAGAATTATTTGACATTATTAAACACAG 50
BSNT_05193___ 51 ATTCGTGCTGATTCTGCTCATCACAATCGGC----GTCACCCTTATTATG 96
|||..|.||||||.|..||||.||| || ||.||.||..|.|.|
RBAM_031670__ 51 ATTTTTACTGATTTTTATCATGACA----GCAGTTGTAACGCTGGTGACG 96
BSNT_05193___ 97 GGTTTTGTGCAATTTAAGGTCATTTCACCGACCTACCAGGCGTCGACACA 146
||.|...|.|||||...|||.|||||.||....||.|||||.||.||.||
RBAM_031670__ 97 GGATACATCCAATTCCGGGTGATTTCGCCCGTTTATCAGGCATCAACCCA 146
BSNT_05193___ 147 GGTGCTGGTTCATGAATCAGACGGTGAAGAAAACTCGAATCTCAGTGACA 196
.|||||..||||||||.||..|||||||.||||.|||||||||||.|||.
RBAM_031670__ 147 AGTGCTCATTCATGAAACAAGCGGTGAAAAAAATTCGAATCTCAGCGACG 196
BSNT_05193___ 197 TCCAGCGAAATCTTCAGTATAGCAGCACGTTCCAATCGATTATGAAAAGC 246
|.||||..||||||||.||.|.||..|||||.|||.||||.|||||||||
RBAM_031670__ 197 TTCAGCTGAATCTTCATTACAACAATACGTTTCAAACGATAATGAAAAGC 246
BSNT_05193___ 247 -----ACTGCCTTGATGGAAGAAGTTAAG-----GCGGAATTGCACCTAT 286
|.|| ||||| || ||||.||| || ||||.||.|
RBAM_031670__ 247 CCGGTAGTG-CTTGA--GA--AAGTGAAGCAGACGC-----TGCATCTTT 286
BSNT_05193___ 287 CTGAATCGGCTTCCTCGCTGAAAGGAAAAGTGGTT----ACCAGCAGTGA 332
||||..||||.|||.|..|.||||.||| |.| ||.|||||.||
RBAM_031670__ 287 CTGAGACGGCATCCGCTTTAAAAGCAAA----GATCACGACAAGCAGCGA 332
BSNT_05193___ 333 AAATGAATCAGAAATCATTAACGTTGCCGTCCAGGATCACGATCCGGCGA 382
||..||.|||||.|||||.|.|.|.||.||.|||||..|..||| |||
RBAM_031670__ 333 AACCGATTCAGAGATCATAACCATAGCGGTGCAGGACGAAAATC---CGA 379
BSNT_05193___ 383 AA---GCGGCTGAGATTGCGAACACGTTAGTGAACAAGTTTGAAAAAGAA 429
|| ||.||.|..||.|||||||||.|..||||.|..|||.||||||||
RBAM_031670__ 380 AACAGGCCGCCGCTATAGCGAACACGCTGATGAAGACATTTAAAAAAGAA 429
BSNT_05193___ 430 GTAGATGAAAGAATGAATGTACAAGGCGTACA-TATATTATCAGAGGCGA 478
||...|||.||.||||||.||.||||||| || |.|.||.||.|||||.|
RBAM_031670__ 430 GTCCGTGACAGGATGAATATAAAAGGCGT-CATTGTTTTGTCTGAGGCAA 478
BSNT_05193___ 479 AGGCTTCTGAAAGCCCGATGATCAAGCCGGC------CAGGCTGCGAAAT 522
|.||.||.||||||||||||.|||||||..| |||| |||
RBAM_031670__ 479 AAGCATCGGAAAGCCCGATGGTCAAGCCTTCGCGCATCAGG------AAT 522
BSNT_05193___ 523 ATGGTCATGGCTTTTGGCGCTGCTGTCATGGGCGGCATTACACTGGCATT 572
||..|.|||||.||.||.||.|||.||||||..||..|.||.||.||.||
RBAM_031670__ 523 ATCATGATGGCGTTCGGTGCGGCTCTCATGGCGGGTGTGACGCTTGCGTT 572
BSNT_05193___ 573 TTTTCTGCATTTTCTCGATGATAC--TTGCAAAAGTGCACGGCAGCTCAG 620
||||||.||||||||.|||||.|| || |||||.|..|||||||||||
RBAM_031670__ 573 TTTTCTCCATTTTCTTGATGAAACCGTT--AAAAGCGAGCGGCAGCTCAG 620
BSNT_05193___ 621 CGAGAGAACCGGATTGCCATG-CTTAGGCTCCGTTCCTG-ATGTCCACAA 668
|||.|.|||.|..||||| || .||||| |.|..|| |||.|..|||
RBAM_031670__ 621 CGAAAAAACAGACTTGCC-TGTTTTAGG----GGTTGTGTATGACATCAA 665
BSNT_05193___ 669 AGGGCGGAAT-------CGCGG---GAT--AAAACATTTCGGGGAGTGA 705
| ||| |.||| ||| |||||||||||||||||||
RBAM_031670__ 666 A------AATCAGCAGACACGGTCTGATGAAAAACATTTCGGGGAGTGA 708
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