Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05192 and RBAM_031660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence pep-align/BSNT_05192___yveL.1.9828.seq
# -bsequence pep-align/RBAM_031660___epsB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05192___yveL-RBAM_031660___epsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05192___yveL-RBAM_031660___epsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05192___yveL
# 2: RBAM_031660___epsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 198/227 (87.2%)
# Similarity: 215/227 (94.7%)
# Gaps: 1/227 ( 0.4%)
# Score: 965.0
#
#
#=======================================
BSNT_05192___ 1 MIFGKKKARRGLAQISVLHNKSVVAEQYRTIRTNIEFSSVQTNLRSILVT 50
|.|.|||:|||||||||||:||:|||||||||||||||||||:|||||||
RBAM_031660__ 1 MGFRKKKSRRGLAQISVLHHKSLVAEQYRTIRTNIEFSSVQTHLRSILVT 50
BSNT_05192___ 51 SSVPGEGKSFSAANLAAVFAQQQEKKVLLVDADLRKPTINQTFQVDNVTG 100
|||||||||||||||||||| ||||||||||||||||||::|:|::||.|
RBAM_031660__ 51 SSVPGEGKSFSAANLAAVFA-QQEKKVLLVDADLRKPTIHETYQLENVQG 99
BSNT_05192___ 101 LTNVLVGNASLSETVQKTPIDNLYVLTSGPTPPNPAELLSSKAMGDLISE 150
|||||||||||.||||||.||||||||||||||||||||||||||:||.|
RBAM_031660__ 100 LTNVLVGNASLGETVQKTLIDNLYVLTSGPTPPNPAELLSSKAMGELIQE 149
BSNT_05192___ 151 IYEQFSLVIFDSPPLLAVADAQILANQTDGSVLVVLSGKTKTDTVLKAKD 200
:|.::|||||||||||||||.||||||||||||||||||||.|||.||:|
RBAM_031660__ 150 MYSRYSLVIFDSPPLLAVADGQILANQTDGSVLVVLSGKTKMDTVQKARD 199
BSNT_05192___ 201 ALEQSNAKLLGALLNKKKMKKSEHYSY 227
||:||.||||||||||||:||:|||||
RBAM_031660__ 200 ALQQSKAKLLGALLNKKKIKKTEHYSY 226
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