Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05192 and RBAM_031660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05192___yveL.1.9828.seq
# -bsequence dna-align/RBAM_031660___epsB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05192___yveL-RBAM_031660___epsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05192___yveL-RBAM_031660___epsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05192___yveL
# 2: RBAM_031660___epsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 523/692 (75.6%)
# Similarity: 523/692 (75.6%)
# Gaps: 19/692 ( 2.7%)
# Score: 1940.5
#
#
#=======================================
BSNT_05192___ 1 --GTGATCTTTGGAAAAAAGAAAGCAAGGCGAGGTTTGGCTCAAATATCT 48
|.|| ||..|||||||||||.||||..|.||..|||||||||||||.
RBAM_031660__ 1 TTGGGA--TTCAGAAAAAAGAAATCAAGAAGGGGACTGGCTCAAATATCC 48
BSNT_05192___ 49 GTTTTACACAATAAATCAGTTGTTGCGGAACAATATCGCACCATTCGGAC 98
||||||||..|.||||||.|.||.||.||||||||.||||||||||||||
RBAM_031660__ 49 GTTTTACATCACAAATCATTGGTGGCTGAACAATACCGCACCATTCGGAC 98
BSNT_05192___ 99 AAACATTGAGTTCTCATCTGTCCAGACCAACTTGCGATCTATCCTCGTCA 148
|||.|||||||||||.|||||.||||||.|.|||||.|||||.|||||||
RBAM_031660__ 99 AAATATTGAGTTCTCCTCTGTTCAGACCCATTTGCGCTCTATTCTCGTCA 148
BSNT_05192___ 149 CCTCCTCTGTGCCTGGTGAAGGTAAATCGTTCAGTGCAGCGAATCTTGCG 198
|.||.||.||.||.||.|||||.|||||.|||||.||.||.||.|||||.
RBAM_031660__ 149 CTTCTTCCGTTCCGGGAGAAGGAAAATCATTCAGCGCCGCCAACCTTGCC 198
BSNT_05192___ 199 GCTGTCTTTGCGCAGCAGCAGGAAAAGAAAGTACTGCTGGTGGATGCCGA 248
||.||.||||| ||||||||||||.||.||.|||||.||.|||||.||
RBAM_031660__ 199 GCGGTATTTGC---GCAGCAGGAAAAAAAGGTGCTGCTCGTCGATGCGGA 245
BSNT_05192___ 249 TTTAAGAAAGCCGACCATCAATCAGACGTTTCAGGTTGATAATGTAACCG 298
||||.||||.|||||.||..|..||||.|.||||.||||.||||||...|
RBAM_031660__ 246 TTTACGAAAACCGACGATACACGAGACCTATCAGCTTGAAAATGTACAAG 295
BSNT_05192___ 299 GGCTGACAAATGTGCTGGTCGGCAATGCTTCACTCAGTGAGACGGTGCAA 348
|.||.||.||||||.|.|||||.||.|||||.|||.|.||.|||||||||
RBAM_031660__ 296 GCCTTACGAATGTGTTAGTCGGAAACGCTTCCCTCGGCGAAACGGTGCAA 345
BSNT_05192___ 349 AAGACGCCGATTGATAACTTATATGTACTGACAAGCGGGCCGACCCCGCC 398
||.||||.||||||||||.|.||.||..|.||.|||||||||||.|||||
RBAM_031660__ 346 AAAACGCTGATTGATAACCTTTACGTCTTAACGAGCGGGCCGACGCCGCC 395
BSNT_05192___ 399 AAACCCGGCAGAACTGCTGTCTTCAAAAGCAATGGGAGACTTAATATC-T 447
.||.|||||.||.||..|.||||||||.||.||||||||..|.|| || .
RBAM_031660__ 396 GAATCCGGCTGAGCTTTTATCTTCAAAGGCGATGGGAGAGCTGAT-TCAG 444
BSNT_05192___ 448 GAGATCTATGAACA----ATTCAGCCTCGTCATCTTTGATTCCCCTCCGC 493
||| |||.||| .|.|||.||.||.||.||.|||||.|||||||
RBAM_031660__ 445 GAG----ATGTACAGCCGGTACAGTCTGGTTATTTTCGATTCACCTCCGC 490
BSNT_05192___ 494 TTTTGGCTGTTGCAGATGCTCAGATTCTAGCAAATCAAACAGACGGCAGC 543
||||.|||||.||.||.|..||||||.||||.||.||.|||||.||.|||
RBAM_031660__ 491 TTTTAGCTGTGGCGGACGGACAGATTTTAGCGAACCAGACAGATGGAAGC 540
BSNT_05192___ 544 GTGCTCGTCGTTTTAAGCGGAAAAACAAAAACCGATACCGTTCTGAAAGC 593
||.||||||||.||.|||||||||||.||||..||||||||.|..||.||
RBAM_031660__ 541 GTTCTCGTCGTCTTGAGCGGAAAAACGAAAATGGATACCGTCCAAAAGGC 590
BSNT_05192___ 594 AAAAGATGCACTGGAACAATCCAATGCGAAGCTGTTAGGCGCTCTTTTAA 643
.|.|||.||.||..|.||.||.||.||.|||||.||.||.||.||..|.|
RBAM_031660__ 591 GAGAGACGCGCTCCAGCAGTCAAAGGCAAAGCTTTTGGGGGCGCTGCTGA 640
BSNT_05192___ 644 ACAAAAAGAAAATGAAAAAATCGGAACACTATTCCTACTAG- 684
|.|||||||||||.||||||.||||.|||||.||.|| |.|
RBAM_031660__ 641 ATAAAAAGAAAATCAAAAAAACGGAGCACTACTCGTA-TTGA 681
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