Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05186 and RBAM_031620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence pep-align/BSNT_05186___yveP.1.9828.seq
# -bsequence pep-align/RBAM_031620___epsF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05186___yveP-RBAM_031620___epsF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05186___yveP-RBAM_031620___epsF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05186___yveP
# 2: RBAM_031620___epsF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 253/384 (65.9%)
# Similarity: 304/384 (79.2%)
# Gaps: 6/384 ( 1.6%)
# Score: 1320.0
#
#
#=======================================
BSNT_05186___ 1 MNSSQKRVLHVLSGMNRGGAETMVMNLYRKMDKSKVQFDFLTYRNDPCAY 50
|.....||||:.|||||||||||:||||||||::||||||||:|||||||
RBAM_031620__ 1 MTDKPMRVLHIFSGMNRGGAETMMMNLYRKMDRTKVQFDFLTHRNDPCAY 50
BSNT_05186___ 51 DEEILSLGGRLFYVPSIGQSNPLTFVRNVRNAIKENGPFSAVHAHTDFQT 100
|||||:||||||||||||.:||:|||:.|:..|:|.|||:|||||||||:
RBAM_031620__ 51 DEEILALGGRLFYVPSIGSTNPITFVKQVKRVIQEKGPFAAVHAHTDFQS 100
BSNT_05186___ 101 GFIALAARLAGVPVRVCHSHNTSWKTGFNWKDRLQLLVFRRLILANATAL 150
|||||||||||||||:||||:|||:...:....:||.||||||.||||||
RBAM_031620__ 101 GFIALAARLAGVPVRICHSHSTSWRGRASRLAGMQLFVFRRLITANATAL 150
BSNT_05186___ 151 CACGEDAGRFLFGQSNMERERVHLLPNGIDLELFAPNGQAADEEKAARGI 200
||||:||||||||: |:: ||||||||||.|||..|...:.||..|||
RBAM_031620__ 151 CACGKDAGRFLFGK---EKD-VHLLPNGIDLGLFAGGGADTEAEKRKRGI 196
BSNT_05186___ 201 AADRLIIGHVARFHEVKNHAFLLKLAAHLKERGVRFQLVLAGDGPLRGEI 250
|..||:|||:.||.|.|||.|||:|||.:||||:..||:||||||||.::
RBAM_031620__ 197 ADGRLVIGHIGRFTEEKNHEFLLRLAADMKERGIGLQLILAGDGPLRTDM 246
BSNT_05186___ 251 EEEARQQNLLSDVLFLGTEERIHELMRTFDVFVMPSLYEGLPVVLVEAQA 300
|..|.:..|..||.|:|.|:|:|.|::|.||||||||||||||.||||||
RBAM_031620__ 247 ENLAAKLGLDDDVRFIGIEDRVHALLKTLDVFVMPSLYEGLPVTLVEAQA 296
BSNT_05186___ 301 SGLPCIISDSITEKVDAGLGLVTRLSLSEPISVWAETIARAAAAGRPKRE 350
||:||:|||.|||:.|||||||.||||.||...||..:.|||.|.:|..|
RBAM_031620__ 297 SGVPCVISDGITEEADAGLGLVKRLSLKEPPGQWASAVLRAAEAAKPDGE 346
BSNT_05186___ 351 FINETLAQLGYDAQQNVGALLNVYNISTEKDHDR 384
.|.|||.:.||||.:|.||::.:||::.:|:.
RBAM_031620__ 347 RIKETLRRQGYDAGENAGAVMKLYNMNWKKEQ-- 378
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