Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05186 and RBAM_031620
See
Amino acid alignment /
Visit
BSNT_05186 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence dna-align/BSNT_05186___yveP.1.9828.seq
# -bsequence dna-align/RBAM_031620___epsF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05186___yveP-RBAM_031620___epsF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05186___yveP-RBAM_031620___epsF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05186___yveP
# 2: RBAM_031620___epsF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1213
# Identity: 799/1213 (65.9%)
# Similarity: 799/1213 (65.9%)
# Gaps: 134/1213 (11.0%)
# Score: 2450.5
#
#
#=======================================
BSNT_05186___ 1 ATGAATAGCAGCCAA----AAGCGCGTGCTCCATGTTCTCAGCGGCATGA 46
|||| |.|.||| |.|||.|||||.||..|..|||||||.||||
RBAM_031620__ 1 ATGA----CTGACAAACCGATGCGGGTGCTGCACATCTTCAGCGGGATGA 46
BSNT_05186___ 47 ACAGGGGCGGCGCGGAAACCATGGTAATGAATTTATATCGGAAGATGGAC 96
|||||||||||||.|||||.|||.|.||||||||.||.||||||||||||
RBAM_031620__ 47 ACAGGGGCGGCGCAGAAACGATGATGATGAATTTGTACCGGAAGATGGAC 96
BSNT_05186___ 97 AAAAGCAAAGTGCAATTTGATTTTTTAACGTATCGAAATGATCCGTGCGC 146
|.||..||.|||||.||||||||||||||..||.|.||.|||||||||||
RBAM_031620__ 97 AGAACGAAGGTGCAGTTTGATTTTTTAACCCATAGGAACGATCCGTGCGC 146
BSNT_05186___ 147 TTATGATGAAGAGATTTTATCTTTAGGCGGGCGGCTTTTTTATGTCCCGA 196
|||||||||.||.|||.|..||.|.|||||.||||||||||||||.||||
RBAM_031620__ 147 TTATGATGAGGAAATTCTCGCTCTCGGCGGACGGCTTTTTTATGTGCCGA 196
BSNT_05186___ 197 GCATTGG--GCAAAGCAATCCC-CTTACATTTGTGAGGAATGTGAGAAAC 243
||||.|| ||| |||.||| .|||||||||||| ||...|..||.|
RBAM_031620__ 197 GCATCGGCAGCA---CAAACCCGATTACATTTGTGA--AACAGGTCAAGC 241
BSNT_05186___ 244 --GCGATAAAAGAAAACGGGCCGTTCAGCGCCGTTCATGCGCACACGGAT 291
|.|||..|.|||||.||.|||||...||||||.||.||.||.||.|||
RBAM_031620__ 242 GGGTGATTCAGGAAAAAGGCCCGTTTGCCGCCGTGCACGCCCATACCGAT 291
BSNT_05186___ 292 TTCCAAACGGGTTTTATCGCCCTTGCGGCAAGGCTCGCCGGAGTGCCGGT 341
||.||..||||.||.|||||.|||||.||..|..|.|||||.||.|||||
RBAM_031620__ 292 TTTCAGTCGGGATTCATCGCGCTTGCCGCTCGTTTAGCCGGCGTCCCGGT 341
BSNT_05186___ 342 CAGGGTATGCCACTCCCACAATACGTCTTGGAAGAC-------------- 377
..||.|.|||||.||.||||.||||||.||| |
RBAM_031620__ 342 GCGGATCTGCCATTCGCACAGTACGTCGTGG----CGGGGGCGGGCGTCG 387
BSNT_05186___ 378 CGGCTT-CAACTGGAAGGATCGCTTGCAGCTGCTCGTGTTCAGGCGGCTC 426
|||||| | |.||| ||||||||.|.||.|||||.|||||.
RBAM_031620__ 388 CGGCTTGC--CGGGA---------TGCAGCTGTTTGTTTTCAGACGGCTG 426
BSNT_05186___ 427 ATTTTGGCAAATGCGACAGCGCTGTGTGCCTGCGGAGAGGATGCGGGCAG 476
||...||||||.||.||.||.|||||.|||||||||.|.||.||||||.|
RBAM_031620__ 427 ATCACGGCAAACGCCACGGCACTGTGCGCCTGCGGAAAAGACGCGGGCCG 476
BSNT_05186___ 477 GTTTTTATT-TGGACAGTCCAATATGGAGCGGGAG-CGTGTTCACCTTCT 524
.||.||||| .|||.|| ||.| || |||| ||.|||.|
RBAM_031620__ 477 TTTCTTATTCGGGAAAG---AAAA---------AGACGTG--CATCTTTT 512
BSNT_05186___ 525 TCCTAACGGGATTGACCTTGAGTTGTTCGCCCCAAATGGGCAGGCG-GCT 573
.||.|||||.|||||.||.|..||.||.||| |||.||.| ||.
RBAM_031620__ 513 GCCGAACGGCATTGATCTCGGCTTATTTGCC-------GGCGGGGGCGCG 555
BSNT_05186___ 574 GA---------TGAAGAAAAAGCAGCACGCGGCATTGCAGCCGACCGGCT 614
|| |||| ||||.|.|| ||.||||||||||.||.|||..|
RBAM_031620__ 556 GACACAGAAGCTGAA-AAAAGGAAG--CGGGGCATTGCAGACGGCCGTTT 602
BSNT_05186___ 615 CATCATCGGCCATGTGGCCCGGTTT-CATGAAGTGAAAAACCACGCGTTC 663
..|.|||||||||.|.|.|||.||| || ||||..||||||||.|..||.
RBAM_031620__ 603 GGTGATCGGCCATATCGGCCGCTTTACA-GAAGAAAAAAACCATGAATTT 651
BSNT_05186___ 664 CTGTTGAAACTTGCCGCACATCTCAAAGAAAGAGGCGTTCGCTTT-CAGC 712
|||.|....||.||.||..||.|.|||||..|.||| .|||.||| ||||
RBAM_031620__ 652 CTGCTCCGGCTGGCAGCTGATATGAAAGAGCGGGGC-ATCGGTTTACAGC 700
BSNT_05186___ 713 TCGTTCTGGCGGGAGACGGGCCGTTGCGCGGGGAGATAGAGGA---GGAG 759
|..||||.||.||||||||.|||.|.|||...||.||.||..| ||.|
RBAM_031620__ 701 TGATTCTCGCCGGAGACGGTCCGCTTCGCACCGACATGGAAAATCTGGCG 750
BSNT_05186___ 760 GCGCGGCAGCAGAATTTGCTATCA-GACGTCCTCTTTTTAGGCACGGAAG 808
|||..||.| |...||| ||.| ||.||.|..|||.|.||||..||||
RBAM_031620__ 751 GCGAAGCTG--GGGCTTG--ATGATGATGTGCGTTTTATCGGCATAGAAG 796
BSNT_05186___ 809 AACGGATCCATGAACTGATGCGAACATTCGATGTATTTGTCATGCCGTCT 858
|.||..|.||||..|||.||..|||..|.|||||||||||||||||||||
RBAM_031620__ 797 ACCGCGTTCATGCCCTGCTGAAAACGCTGGATGTATTTGTCATGCCGTCT 846
BSNT_05186___ 859 CTGTACGAAGGCTTGCCGGTTGTGCTTGTGGAAGCGCAGGCGTCGGGGCT 908
||.||.|||||..||||.||...|||.||.|||||||||||.||.|||.|
RBAM_031620__ 847 CTTTATGAAGGGCTGCCCGTCACGCTCGTTGAAGCGCAGGCCTCCGGGGT 896
BSNT_05186___ 909 TCCATGCATCATTTCAGACAGCATTACAGAAAAAGTCGACGCCGGTCTCG 958
.||.|||.|.||.||||||.||||.||.|||.|||.|||.|||||.||||
RBAM_031620__ 897 GCCGTGCGTGATATCAGACGGCATAACGGAAGAAGCCGATGCCGGGCTCG 946
BSNT_05186___ 959 GGCTTGTCACAAGATTAAGTCTTTCTGAGCCG--------ATCAGCGTCT 1000
||||.||||.|||..|.||.||....||.||| ||..||.||.
RBAM_031620__ 947 GGCTGGTCAAAAGGCTCAGCCTCAAAGAACCGCCCGGACAATGGGCATCC 996
BSNT_05186___ 1001 GGGCTGAAACCATTGCAAGGGCGGCCGCCGCAGGCAGGCCGAAGC----- 1045
|.|.||..|| ||||.||.| |||| |.|.||||
RBAM_031620__ 997 GCGGTGTTAC--------GGGCAGCAG----AGGC--GGCAAAGCCTGAC 1032
BSNT_05186___ 1046 -GTGAGTTCATCAACGAAACACTCGCTCAACTTGGCTACGATGC-ACAGC 1093
|.|||..|||.||.|||||.|||...|..|..||.||.||.|| ..||
RBAM_031620__ 1033 GGGGAGCGCATTAAAGAAACCCTCAGACGGCAGGGATATGACGCGGGAG- 1081
BSNT_05186___ 1094 AAAATGTAGGAGCGCTGCTGAATGTATACAACATCAGCACGGAAAAGGAC 1143
||||||..||.||..|..||||..|.|||||.||.|....|.|||||||.
RBAM_031620__ 1082 AAAATGCGGGGGCTGTTATGAAGCTTTACAATATGAATTGGAAAAAGGAA 1131
BSNT_05186___ 1144 CA-TGACCGATGA 1155
|| |.|
RBAM_031620__ 1132 CAGTAA------- 1137
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.