Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05183 and RBAM_031600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence pep-align/BSNT_05183___yveR.1.9828.seq
# -bsequence pep-align/RBAM_031600___epsH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05183___yveR-RBAM_031600___epsH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05183___yveR-RBAM_031600___epsH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05183___yveR
# 2: RBAM_031600___epsH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 235/345 (68.1%)
# Similarity: 278/345 (80.6%)
# Gaps: 1/345 ( 0.3%)
# Score: 1249.0
#
#
#=======================================
BSNT_05183___ 1 METSAVSLLVAVYNTETYIRTCLESLRNQTVDNIEIIIVNDGSQDASPDI 50
|||.|||||:||||||||:..||:||.||::.||||:.|||||.|.||.:
RBAM_031600__ 1 METPAVSLLIAVYNTETYLERCLDSLLNQSLANIEIVAVNDGSTDQSPAV 50
BSNT_05183___ 51 AEEYAKMDNRFKVIHQENQGLGAVRNKGIEAARGEFIAFIDSDDWIEPDY 100
.|.|.|.|.|.:||||:|:||||||||||||||||||||||:|||:||||
RBAM_031600__ 51 LEAYQKRDERIRVIHQQNRGLGAVRNKGIEAARGEFIAFIDADDWVEPDY 100
BSNT_05183___ 101 CEQML-RAAGDETDLVICNYAAEFEDTGKTMDSDIAQTYQDQPKEHYIKA 149
|.:|. :|..|:.|||||.|||||.|||||..|.||..|..:||:.|:|.
RBAM_031600__ 101 CLRMYEKAKADQADLVICEYAAEFADTGKTAVSTIASAYAGRPKQLYLKD 150
BSNT_05183___ 150 LFEGKVRGFSWNKLYRRSMIEAHRLSFPLRGELEHVEDQFFSFRAHFFAR 199
||||:|.||||||||:|:|||.|:|.||||.||||||||:||.|||.:|.
RBAM_031600__ 151 LFEGRVSGFSWNKLYKRTMIEHHQLRFPLRDELEHVEDQYFSLRAHVYAG 200
BSNT_05183___ 200 SVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYEANAAFLQENNKLEE 249
:||||..|||||||||:||||.||||||:|||.||..|..||:||..|:|
RBAM_031600__ 201 AVSYVDQPLYHYRIHLTSIVQSYQKKLFDSGLVLYRLNETFLRENGCLQE 250
BSNT_05183___ 250 YRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLS 299
||:|||.|||.|.::|:|||||.:...|..||.:|:..|||||||:.|||
RBAM_031600__ 251 YRQELDFFIVQHGTVCLLNEWKRNNGGRFSEKWKNISRICADPVFRLSLS 300
BSNT_05183___ 300 KTGTAPFDTKRSCLLLMAKYRMIPFVAMASAVYQRVIEYKMRNRG 344
||||||||.|||||||:||.::||||::|||.|||.|||||:.||
RBAM_031600__ 301 KTGTAPFDAKRSCLLLLAKLKLIPFVSLASAAYQRAIEYKMKIRG 345
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