Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05181 and RBAM_031580

See DNA alignment / Visit BSNT_05181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:39
# Commandline: needle
#    -asequence pep-align/BSNT_05181___yveT.1.9828.seq
#    -bsequence pep-align/RBAM_031580___epsJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05181___yveT-RBAM_031580___epsJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05181___yveT-RBAM_031580___epsJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05181___yveT
# 2: RBAM_031580___epsJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity:     221/346 (63.9%)
# Similarity:   265/346 (76.6%)
# Gaps:           6/346 ( 1.7%)
# Score: 1142.0
# 
#
#=======================================

BSNT_05181___      1 MT-PLVSIIVPMYHVEPFIGECIDSLLRQTLSDIEIILVNDGTPDRSGEI     49
                     || ||||:|||||..|||:.||..||.:|||.|||||.||||:||:||.|
RBAM_031580__      1 MTAPLVSVIVPMYKTEPFMKECAVSLTKQTLRDIEIIFVNDGSPDQSGRI     50

BSNT_05181___     50 AEDYAKRDARIRVIHQANGGLSSARNTGIKAARGTYIGFVDGDDYVSSAM     99
                     ||.:|..||||||||:.|||||||||.|||||||.||||.||||||:..|
RBAM_031580__     51 AEQFAAEDARIRVIHKENGGLSSARNAGIKAARGRYIGFADGDDYVTETM    100

BSNT_05181___    100 FQRLAEEAEENRLDIVGCGFYKQS-SDRRTYVPPQLEANRVLTKPEMTER    148
                     |:||.||||:|||||.|||:||:: |.:|||:||.|...||.|..|||..
RBAM_031580__    101 FERLYEEAEKNRLDIAGCGYYKETPSKKRTYMPPSLPPGRVFTAHEMTAL    150

BSNT_05181___    149 LKHAHETRFIWYVWRYLYRRELFDRANLMFDEDIRFAEDSPFNLSAFCEA    198
                     |..|||.|||||||||:||||...  .|:|.|||||||||||||:||.:|
RBAM_031580__    151 LTRAHEHRFIWYVWRYIYRREALQ--GLLFHEDIRFAEDSPFNLAAFRQA    198

BSNT_05181___    199 ERVKMLDEGLYIYRENPNSLTEIPYKPAMDEHLQKQYQAKIAFYNHYGLA    248
                     .|:|::|||||||||||.||||.|:||.:|:.|||||:||:|||...||.
RBAM_031580__    199 ARIKVIDEGLYIYRENPQSLTETPFKPHLDQELQKQYKAKMAFYEANGLT    248

BSNT_05181___    249 GACQEDLNVYICRHQLPMLLANACASPNSPKDIKKKIRQILSYDMVRQAV    298
                     .||:.|::.|:|:||:|||:|||||:|.....|...|.:||:||||:.||
RBAM_031580__    249 DACRSDIDTYLCKHQIPMLIANACAAPQPSHQITAHIGRILTYDMVKTAV    298

BSNT_05181___    299 RHTP--FEKLLRGERLVLALCKWRLTFLIKLFFEHRGIMKGSAKQA    342
                     |.||  .::||.|||:||.|||.||..|:..|||.:...||||:.|
RBAM_031580__    299 RRTPCRHKQLLAGERVVLGLCKMRLPLLLHAFFERKSKEKGSAEGA    344


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