Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05179 and RBAM_031570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence pep-align/BSNT_05179.1.9828.seq
# -bsequence pep-align/RBAM_031570___epsK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05179-RBAM_031570___epsK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05179-RBAM_031570___epsK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05179
# 2: RBAM_031570___epsK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 505
# Identity: 369/505 (73.1%)
# Similarity: 423/505 (83.8%)
# Gaps: 23/505 ( 4.6%)
# Score: 1920.0
#
#
#=======================================
BSNT_05179 1 -----------------------MTPFIVKTLGVEAFGFVHLTQNVINYF 27
||||||||||||||||||||||:||||
RBAM_031570__ 1 MKFAINFGANVTAFLLSVFLSVWMTPFIVKTLGVEAFGFVHLTQNIINYF 50
BSNT_05179 28 SVITVALSSVVVRFFSVAAHRGEREKANAYISNYLAASVLISLLLLLPLA 77
|:||||||||||||||||||||.|::||||:||||||||:|||||.:|||
RBAM_031570__ 51 SIITVALSSVVVRFFSVAAHRGNRDEANAYVSNYLAASVVISLLLAVPLA 100
BSNT_05179 78 GSAFFIDRVMNVPQALLADVRLSILIGSLLFILTFLMAGFGAAPFYANRL 127
|:|||||::||||..||.||||||:|||:||:|||.||||...||:||:|
RBAM_031570__ 101 GTAFFIDKIMNVPAGLLTDVRLSIVIGSVLFMLTFFMAGFATGPFFANKL 150
BSNT_05179 128 YITSSIQAVQMLIRVLSVLLLFACFAPKIWQIQLAALAGAVIASVLSFYF 177
||||||||||||:|||.||.||.|..||||||||:||||||.|:||:|:|
RBAM_031570__ 151 YITSSIQAVQMLVRVLCVLALFTCLPPKIWQIQLSALAGAVCAAVLTFFF 200
BSNT_05179 178 FKKLIPWFSFRMKDLSFRTSKELFQAGAWSSVNQIGVLLFLQIDLLTANL 227
||||||||||..|.||.:|||.||.||||||||||||||||||||:||||
RBAM_031570__ 201 FKKLIPWFSFSRKTLSLQTSKVLFSAGAWSSVNQIGVLLFLQIDLMTANL 250
BSNT_05179 228 MLGASASGKYAAIIQFPLLLRSLAGTVASLFAPIMTSYYSKGDMEGLMNY 277
:||.|.:|.|||||||||||||||||:||||||::||||||||||||::|
RBAM_031570__ 251 VLGPSEAGVYAAIIQFPLLLRSLAGTLASLFAPVLTSYYSKGDMEGLLSY 300
BSNT_05179 278 ANKAVRLNGLLLALPAALLGGLAGPFLTIWLGPSFSTIAPLLFIHAGYLV 327
||||||:||||||||||||||||.|||.|||||||...||||:|||.||.
RBAM_031570__ 301 ANKAVRMNGLLLALPAALLGGLAEPFLAIWLGPSFVQTAPLLYIHAAYLA 350
BSNT_05179 328 VSLAFMPLFYIWTAFNQQKTPAIVTLLLGAVNVVLAVTLSGPAHLGLYGI 377
|||:.|||||:|||||:|||||:|||.||.:||:|||.||||||||||||
RBAM_031570__ 351 VSLSVMPLFYVWTAFNKQKTPAVVTLCLGGLNVILAVVLSGPAHLGLYGI 400
BSNT_05179 378 TLAGAISLILKNAIFTPLYVSRITGYKKHVFFKGIIGLLSAAVFAWAVCK 427
|:|||:|||||||:|||||||.|||::|..|:||:.|.|:|||||||||:
RBAM_031570__ 401 TIAGAVSLILKNAVFTPLYVSHITGFQKTAFYKGMFGPLAAAVFAWAVCR 450
BSNT_05179 428 AIQFVVKIDSWPSLIATGVTVSFCYAVFAFMLVCTKEERQLVLKRFRKTK 477
.|:....:|||..|||.|:.|...||.|||..:||||||:|.|::.||.|
RBAM_031570__ 451 GIRLFSPLDSWAGLIAAGLAVCMSYAAFAFFFICTKEERRLALQKCRKVK 500
BSNT_05179 478 GAVNL 482
|||.:
RBAM_031570__ 501 GAVQI 505
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