Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05173 and RBAM_031530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence pep-align/BSNT_05173___yvfF.1.9828.seq
# -bsequence pep-align/RBAM_031530___epsO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05173___yvfF-RBAM_031530___epsO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05173___yvfF-RBAM_031530___epsO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05173___yvfF
# 2: RBAM_031530___epsO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity: 215/323 (66.6%)
# Similarity: 260/323 (80.5%)
# Gaps: 3/323 ( 0.9%)
# Score: 1163.0
#
#
#=======================================
BSNT_05173___ 1 MDSKHSMISLKQKLSGLLDVIPKQSEIIYADYPLYGNVGDLFIMKGTEAF 50
|||:|.|..||:.|:|||.|||.||:|||||||||||||||.||||||||
RBAM_031530__ 1 MDSRHVMSRLKETLTGLLSVIPPQSDIIYADYPLYGNVGDLLIMKGTEAF 50
BSNT_05173___ 51 FKEHGIRVRKRWNPDNFPVGRKLDPHLIIVCQGGGNFGDLYPYYQGFREK 100
||.||||||:||||||||.||:.|...||||||||||||||||||.||||
RBAM_031530__ 51 FKAHGIRVRQRWNPDNFPFGRRADKKTIIVCQGGGNFGDLYPYYQTFREK 100
BSNT_05173___ 101 IVQTYPNHKIVILPQSIYFQNKDNLKRTAEIFSKHANLHIMTREKASYAT 150
||:::|.::|||||||||:|::..|::|:.:|::|.:||:.||:..||.|
RBAM_031530__ 101 IVKSFPENRIVILPQSIYYQDETRLEKTSALFAEHKDLHLFTRDHVSYET 150
BSNT_05173___ 151 AQAYFTTNHIQLLPDMAHQLFPVIPTQQPSNQKLRFIRTDHEANQALQEH 200
|:.:|:.|||.|:|||||||:|:..:..||..:|.|||||.|.|..||.:
RBAM_031530__ 151 AKHFFSANHIGLMPDMAHQLYPMAASAAPSRGRLHFIRTDGEINPKLQNN 200
BSNT_05173___ 201 AEAESYDWRTVLSASDRRTIAFLQTLNVLNKKAGNPLPIAYIWEKYSDYI 250
:..:|.||:.||||||||.|||.|||||||||||||||||..|::|||::
RBAM_031530__ 201 SSVKSCDWQDVLSASDRRGIAFFQTLNVLNKKAGNPLPIARFWKRYSDFL 250
BSNT_05173___ 251 VQKAIRFFSRYESVETSRLHGHILSSLLQKENTVIDNSYGKNANYFHTWM 300
.:|::.||||||||||||||||||||||.|.||||||||||||||::|||
RBAM_031530__ 251 TKKSVLFFSRYESVETSRLHGHILSSLLGKPNTVIDNSYGKNANYYYTWM 300
BSNT_05173___ 301 EGVPSTHLI-QHASKKENLPAHM 322
...|...|| :.|..|||||.
RBAM_031530__ 301 HEAPDVRLIGETAGTKENLPL-- 321
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