Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05172 and RBAM_031520

See DNA alignment / Visit BSNT_05172 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:39
# Commandline: needle
#    -asequence pep-align/BSNT_05172___yvfG.1.9828.seq
#    -bsequence pep-align/RBAM_031520___yvfG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05172___yvfG-RBAM_031520___yvfG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05172___yvfG-RBAM_031520___yvfG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05172___yvfG
# 2: RBAM_031520___yvfG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 72
# Identity:      65/72 (90.3%)
# Similarity:    69/72 (95.8%)
# Gaps:           0/72 ( 0.0%)
# Score: 334.0
# 
#
#=======================================

BSNT_05172___      1 MSELFSVPYFIENLKQHIEMNQSEDKIHAMNSYYRSVVSTLVQDQLTKNA     50
                     |||||||||||||..||||||.:||:|||||||||||||||||||||||:
RBAM_031520__      1 MSELFSVPYFIENFTQHIEMNPNEDQIHAMNSYYRSVVSTLVQDQLTKNS     50

BSNT_05172___     51 VVLKRIQHLDEAYNKVKRGESK     72
                     ||||||||||||||||||||:|
RBAM_031520__     51 VVLKRIQHLDEAYNKVKRGETK     72


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