Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05172 and RBAM_031520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence dna-align/BSNT_05172___yvfG.1.9828.seq
# -bsequence dna-align/RBAM_031520___yvfG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05172___yvfG-RBAM_031520___yvfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05172___yvfG-RBAM_031520___yvfG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05172___yvfG
# 2: RBAM_031520___yvfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 184/219 (84.0%)
# Similarity: 184/219 (84.0%)
# Gaps: 0/219 ( 0.0%)
# Score: 780.0
#
#
#=======================================
BSNT_05172___ 1 ATGTCTGAACTTTTTTCCGTCCCTTATTTTATTGAGAATTTAAAACAGCA 50
|||||.|||||||||||.||.||||||||||||||.||.||.|.||||||
RBAM_031520__ 1 ATGTCAGAACTTTTTTCTGTTCCTTATTTTATTGAAAACTTTACACAGCA 50
BSNT_05172___ 51 TATTGAAATGAATCAGTCTGAGGATAAAATCCACGCGATGAACAGCTACT 100
.|||||||||||||.|..|||.||..||||.||.||||||||||||||.|
RBAM_031520__ 51 CATTGAAATGAATCCGAATGAAGACCAAATTCATGCGATGAACAGCTATT 100
BSNT_05172___ 101 ACCGTTCCGTTGTCTCAACACTCGTGCAGGACCAGCTGACGAAAAACGCA 150
||||.|||||.||||||||.||.||.|||||.|||||||||||||||.|.
RBAM_031520__ 101 ACCGCTCCGTCGTCTCAACCCTTGTTCAGGATCAGCTGACGAAAAACTCG 150
BSNT_05172___ 151 GTTGTCCTGAAACGGATTCAGCATTTAGATGAAGCATACAACAAAGTCAA 200
|||||.||.|||.|.|||||||||||.|||||.||.|||||||||||.||
RBAM_031520__ 151 GTTGTGCTCAAAAGAATTCAGCATTTGGATGAGGCGTACAACAAAGTAAA 200
BSNT_05172___ 201 ACGTGGAGAATCAAAATAA 219
|||.||||||.||||||||
RBAM_031520__ 201 ACGCGGAGAAACAAAATAA 219
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