Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05149 and RBAM_031470

See DNA alignment / Visit BSNT_05149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:38
# Commandline: needle
#    -asequence pep-align/BSNT_05149___yvfV.1.9828.seq
#    -bsequence pep-align/RBAM_031470___yvfV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05149___yvfV-RBAM_031470___yvfV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05149___yvfV-RBAM_031470___yvfV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05149___yvfV
# 2: RBAM_031470___yvfV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     216/238 (90.8%)
# Similarity:   225/238 (94.5%)
# Gaps:           0/238 ( 0.0%)
# Score: 1151.0
# 
#
#=======================================

BSNT_05149___      1 MKVSLFVTCLVDMFQTNVGKATVELLERLGCEVDFPEGQICCGQPAYNSG     50
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_031470__      1 MKVSLFVTCLVDMFQTNVGKATVEVLERLGCEVDFPEGQICCGQPAYNSG     50

BSNT_05149___     51 YVHDAKKAMKRMIETFQDSEYVVSPSGSCTTMFREYPHLFQDDPKWADKA    100
                     ||.||||||||||..|:::||||||||||||||||||||||||||||.||
RBAM_031470__     51 YVTDAKKAMKRMIAAFEEAEYVVSPSGSCTTMFREYPHLFQDDPKWAAKA    100

BSNT_05149___    101 QKLADKTYELTDFIVNVLGVEDVGATLHTKATLHTSCHMTRLLGVREEPM    150
                     |:|||||||||||||||||||||||.||.|||:||||||||||||.||||
RBAM_031470__    101 QQLADKTYELTDFIVNVLGVEDVGAVLHKKATVHTSCHMTRLLGVSEEPM    150

BSNT_05149___    151 KLLSHVKGLQFTELPGKHNCCGFGGTFSVKMAQISEQMVDEKVECVEETG    200
                     |||.|||||:.|.|||||.||||||||||||||||||||||||.|||:|.
RBAM_031470__    151 KLLRHVKGLELTALPGKHQCCGFGGTFSVKMAQISEQMVDEKVACVEDTE    200

BSNT_05149___    201 AEVLIGADCGCLMNIGGRLDRKDKNVKVMHIAEVLNSR    238
                     ||||||||||||||||||||||||||:|||||||||||
RBAM_031470__    201 AEVLIGADCGCLMNIGGRLDRKDKNVRVMHIAEVLNSR    238


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