Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05149 and RBAM_031470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence dna-align/BSNT_05149___yvfV.1.9828.seq
# -bsequence dna-align/RBAM_031470___yvfV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05149___yvfV-RBAM_031470___yvfV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05149___yvfV-RBAM_031470___yvfV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05149___yvfV
# 2: RBAM_031470___yvfV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 719
# Identity: 590/719 (82.1%)
# Similarity: 590/719 (82.1%)
# Gaps: 4/719 ( 0.6%)
# Score: 2410.0
#
#
#=======================================
BSNT_05149___ 1 ATGAAAGTCTCACTTTTTGTCACTTGTCTTGTTGATATGTTTCAAACAAA 50
||||||||||||.|.||||||||.||.|||||.||||||||.||.||.||
RBAM_031470__ 1 ATGAAAGTCTCATTATTTGTCACGTGCCTTGTGGATATGTTCCAGACCAA 50
BSNT_05149___ 51 TGTCGGAAAAGCAACGGTTGAGCTGCTGGAGCGGCTTGGGTGCGAGGTTG 100
|||||||||.||.|||||||||.|||||||.|||||.|||||.|||||.|
RBAM_031470__ 51 TGTCGGAAAGGCGACGGTTGAGGTGCTGGAACGGCTCGGGTGTGAGGTGG 100
BSNT_05149___ 101 ATTTTCCAGAAGGGCAGATTTGCTGCGGACAGCCGGCTTACAACAGCGGC 150
|||||||.||.|||||||||||||||||.|||||.||.|||||||||||.
RBAM_031470__ 101 ATTTTCCCGAGGGGCAGATTTGCTGCGGGCAGCCCGCATACAACAGCGGG 150
BSNT_05149___ 151 TATGT-ACATGACGCCAAAAAAGCAATGAAACGGATGATCGAAACGTTTC 199
||||| || .||.||.||||||||.|||||.||||||||.|...|||||.
RBAM_031470__ 151 TATGTGAC-GGATGCGAAAAAAGCGATGAAGCGGATGATTGCCGCGTTTG 199
BSNT_05149___ 200 AGGATTCCGAATATGTTGTCAGTCCTTCGGGTTCCTGCACAACGATGTTC 249
|.||..|.||.||.|||||||||||.||.||||||||.||.|||||||||
RBAM_031470__ 200 AAGAAGCGGAGTACGTTGTCAGTCCGTCAGGTTCCTGTACGACGATGTTC 249
BSNT_05149___ 250 CGGGAGTATCCGCACCTGTTTCAGGATGATCCGAAATGGGCCGATAAAGC 299
||.||.||||||||.|||||||||||.||||||||.|||||.|..|||||
RBAM_031470__ 250 CGTGAATATCCGCATCTGTTTCAGGACGATCCGAAGTGGGCGGCAAAAGC 299
BSNT_05149___ 300 GCAAAAGCTGGCGGATAAAACGTATGAACTGACAGATTTTATTGTGAACG 349
|||..||||.|||||.|||||.|||||..|.||.||||||||.||.||||
RBAM_031470__ 300 GCAGCAGCTTGCGGACAAAACATATGAGTTAACGGATTTTATCGTTAACG 349
BSNT_05149___ 350 TCCTTGGGGTAGAGGATGTCGGCGCGACCCTTCATACAAAAGCGACCTTA 399
|.||.|||||.|||||||||||.|||...||.||||.|||||||||..|.
RBAM_031470__ 350 TTCTCGGGGTGGAGGATGTCGGGGCGGTGCTGCATAAAAAAGCGACAGTC 399
BSNT_05149___ 400 CATACGTCGTGCCATATGACTAGGCTGCTGGGTGT-TCGGGAGGAGCCGA 448
|||||.||||||||||||||.||||||||.||.|| || |||||||||||
RBAM_031470__ 400 CATACATCGTGCCATATGACGAGGCTGCTCGGCGTGTC-GGAGGAGCCGA 448
BSNT_05149___ 449 TGAAGCTGTTGAGCCATGTGAAGGGCCTGCAGTTTACAGAGCTTCCGGGC 498
|||||||.|||.|||||||.|||||.||..||.|.||.|.||||||.||.
RBAM_031470__ 449 TGAAGCTTTTGCGCCATGTCAAGGGGCTCGAGCTGACCGCGCTTCCCGGA 498
BSNT_05149___ 499 AAACATAACTGCTGCGGATTCGGAGGAACGTTCTCCGTCAAGATGGCGCA 548
|||||..|.|||||||||||||||||||||||.||.||.||.||||||||
RBAM_031470__ 499 AAACACCAATGCTGCGGATTCGGAGGAACGTTTTCTGTGAAAATGGCGCA 548
BSNT_05149___ 549 GATTTCTGAGCAGATGGTCGATGAAAAAGTCGAATGTGTGGAGGAAACGG 598
.||.|||||.||.|||||.|||||.||.||||..||.|||||.||.||||
RBAM_031470__ 549 AATCTCTGAACAAATGGTGGATGAGAAGGTCGCCTGCGTGGAAGACACGG 598
BSNT_05149___ 599 GAGCAGAGGTGCTGATCGGTGCTGACTGCGGCTGTTTGATGAATATCGGG 648
..||.||||||||||||||.||.||.|||||.|||.|||||||||||||.
RBAM_031470__ 599 AGGCCGAGGTGCTGATCGGAGCGGATTGCGGATGTCTGATGAATATCGGC 648
BSNT_05149___ 649 GGACGGCTTGACCGAAAAGATAAGAATGTCAAAGTGATGCACATCGCCGA 698
||.||.||||||||.||.|||||.||.||||.|||.||||||||||||||
RBAM_031470__ 649 GGGCGTCTTGACCGTAAGGATAAAAACGTCAGAGTCATGCACATCGCCGA 698
BSNT_05149___ 699 AGTGCTCAACAGCAGATAA 717
||||||.||||||||||||
RBAM_031470__ 699 AGTGCTGAACAGCAGATAA 717
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