Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05147 and RBAM_031450

See DNA alignment / Visit BSNT_05147 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:38
# Commandline: needle
#    -asequence pep-align/BSNT_05147___yvbY.1.9828.seq
#    -bsequence pep-align/RBAM_031450___yvbY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05147___yvbY-RBAM_031450___yvbY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05147___yvbY-RBAM_031450___yvbY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05147___yvbY
# 2: RBAM_031450___yvbY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     188/241 (78.0%)
# Similarity:   216/241 (89.6%)
# Gaps:           1/241 ( 0.4%)
# Score: 1001.0
# 
#
#=======================================

BSNT_05147___      1 -MTKGTIQNQESFLNRIASSLGRERRTGGVAVPEWAHQPQYKTLEGYSAD     49
                      |.|||:.:|||||||||.|||||||..||::|||.:||||:|..|.:.|
RBAM_031450__      1 MMMKGTVTHQESFLNRIAESLGRERRKSGVSLPEWKYQPQYQTHAGCTED     50

BSNT_05147___     50 DLVTVLKNHCVKIHTELIETDSTGLYDALREQVSRFSGGPVIIPKDPRFE     99
                     ||||:||:|||.|||||||||:.|||||||.||:||.|||||||||.|||
RBAM_031450__     51 DLVTMLKDHCVNIHTELIETDAAGLYDALRTQVNRFEGGPVIIPKDSRFE    100

BSNT_05147___    100 EYGLKSLLTKDWPSEGTPVWEWDADKGEENIKKAEQANVGITFSEITLAE    149
                     .|||::|:|::||.||.|||||||::|.:||:||||||||||||||||||
RBAM_031450__    101 TYGLQTLMTEEWPDEGIPVWEWDAEQGAKNIEKAEQANVGITFSEITLAE    150

BSNT_05147___    150 SGTVVLFSSKDIGRSLSLLPTTYIAIVPKSSIVPRMTQASDIIRQNIADG    199
                     |.||||::|:..|||:||||||||||:|||||||||||||||::|.|.||
RBAM_031450__    151 SATVVLYASEHAGRSVSLLPTTYIAIIPKSSIVPRMTQASDILKQQIRDG    200

BSNT_05147___    200 VTVPSCINYITGPSNSADIEMDLVVGVHGPVKAAYILVSDR    240
                     ||||||||||||||||||||||||||||||||||||||:||
RBAM_031450__    201 VTVPSCINYITGPSNSADIEMDLVVGVHGPVKAAYILVNDR    241


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