Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05147 and RBAM_031450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence dna-align/BSNT_05147___yvbY.1.9828.seq
# -bsequence dna-align/RBAM_031450___yvbY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05147___yvbY-RBAM_031450___yvbY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05147___yvbY-RBAM_031450___yvbY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05147___yvbY
# 2: RBAM_031450___yvbY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 745
# Identity: 537/745 (72.1%)
# Similarity: 537/745 (72.1%)
# Gaps: 41/745 ( 5.5%)
# Score: 1884.0
#
#
#=======================================
BSNT_05147___ 1 ---ATGACGAAGGGAAC-------CATTCA-GAATCAAGAGAGCTTTTTA 39
||||.|||.||.|| || ||| ||||| |||||||
RBAM_031450__ 1 ATGATGATGAAAGGGACGGTTACACA-TCAGGAATC-------CTTTTTA 42
BSNT_05147___ 40 AACCGAATCGCATCCAGCCTGGGCCGTGAACGAAGAACAGGAGGCGTGGC 89
|||||.|||||....||.||||||.|.||.||.||.|.|..|||||||.|
RBAM_031450__ 43 AACCGGATCGCCGAAAGTCTGGGCAGAGAGCGCAGGAAATCAGGCGTGTC 92
BSNT_05147___ 90 AGTCCCTGAATGGGCGCATCAGCCGCAATATAAAACACTTGAAGGTTATT 139
..|.|||||||||..|.|||||||.||||||.||||.|.||..||.|.|.
RBAM_031450__ 93 CCTGCCTGAATGGAAGTATCAGCCTCAATATCAAACGCATGCGGGCTGTA 142
BSNT_05147___ 140 CAGCGGATGA-CTTAGTCACAGTGCTCAAAAACCATTGTGTCAAAATCCA 188
|.|..||.|| ||| |||||..||||.|||.||||.||.|||||.||.||
RBAM_031450__ 143 CGGAAGACGATCTT-GTCACGATGCTGAAAGACCACTGCGTCAACATTCA 191
BSNT_05147___ 189 TACAGAGCTGATTGAAACGGATTCAACCGGCCTTTACGATGCCCTGCGCG 238
|||.||.|||||.|||||||||.||.||||.||||||||.||..|||||.
RBAM_031450__ 192 TACCGAACTGATCGAAACGGATGCAGCCGGGCTTTACGACGCTTTGCGCA 241
BSNT_05147___ 239 AGCAAGTCAGCCGCTTTTCCGGAGGCCCTGTCATCATTCCGAAGGACCCC 288
.|||.||.|.|||||||...|||||.|||||||||||||||||||||..|
RBAM_031450__ 242 CGCAGGTGAACCGCTTTGAAGGAGGGCCTGTCATCATTCCGAAGGACAGC 291
BSNT_05147___ 289 CGCTTTGAAGAATACGGACTGAAAAGCCTGCTCACCAAGGACTGGCCGAG 338
|||||||||...|||||..||.|.|.|||..|.||..|.||.||||||..
RBAM_031450__ 292 CGCTTTGAAACGTACGGCTTGCAGACCCTTATGACAGAAGAGTGGCCGGA 341
BSNT_05147___ 339 TGAAGGAACGCCGGTCTGGGAGTGGGATGCTGACAAAGGCGAGGAAAATA 388
||||||.|..||.||.|||||.|||||.||.||..||||.|.|.||||||
RBAM_031450__ 342 TGAAGGGATTCCCGTTTGGGAATGGGACGCGGAACAAGGAGCGAAAAATA 391
BSNT_05147___ 389 TCAAAAAAGCGGAGCAAGCCAATGTAGGGATTACATTCAGCGAAATAACA 438
|..||||||||||.|||||.|||||.||.||||||||||||||.||.||.
RBAM_031450__ 392 TTGAAAAAGCGGAACAAGCGAATGTGGGCATTACATTCAGCGAGATCACG 441
BSNT_05147___ 439 TTGGCTGAGTCGGGGACGGTTGTCCTCTTCTCCTCAAAAGA-CAT--CGG 485
.|.||.||.||.|..||.||.||..|.|...|.|| ||| ||| |||
RBAM_031450__ 442 CTTGCGGAATCAGCCACCGTCGTTTTGTATGCGTC---AGAGCATGCCGG 488
BSNT_05147___ 486 CCGATCTCTCAGCCTTCTGCCGACGACTTATATTGCGATCGTGCCGAAAT 535
|||.||..|||||||.||.|||||.||.|||||.||.|||.|.|||||||
RBAM_031450__ 489 CCGTTCCGTCAGCCTGCTTCCGACCACCTATATCGCAATCATCCCGAAAT 538
BSNT_05147___ 536 CAAGCATTGTACCGAGAATGACACAAGCCAGTGATATCATCCGCCAAAAC 585
|...||||||.||||||||||||||.|||||.|||||..| .||||
RBAM_031450__ 539 CTTCCATTGTGCCGAGAATGACACAGGCCAGCGATATATT-----GAAAC 583
BSNT_05147___ 586 ATTGC-------GGACGGTGTCACTGTTCCTTCATGTATCAACTACATTA 628
| || .|||||.|||||.||||||||.||.||||||||.||||
RBAM_031450__ 584 A--GCAGATCAGAGACGGCGTCACCGTTCCTTCCTGCATCAACTATATTA 631
BSNT_05147___ 629 CCGGACCGAGCAACTCAGCAGACATTGAAATGGATTTAGTTGTGGGAGTG 678
|.||||||||||||||.||.||.||.|||||||||||.|||||.||.||.
RBAM_031450__ 632 CTGGACCGAGCAACTCGGCCGATATCGAAATGGATTTGGTTGTCGGCGTC 681
BSNT_05147___ 679 CACGGACCTGTAAAGGCAGCATATATTCTCGTCTCTGATCGCTGA 723
||||||||.||.||.||.||.|||||.|||||...|||.||.|.|
RBAM_031450__ 682 CACGGACCCGTTAAAGCCGCTTATATCCTCGTGAATGACCGATAA 726
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