Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06143 and RBAM_031430

See DNA alignment / Visit BSNT_06143 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:37
# Commandline: needle
#    -asequence pep-align/BSNT_06143___gntK.1.9828.seq
#    -bsequence pep-align/RBAM_031430___gntK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06143___gntK-RBAM_031430___gntK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06143___gntK-RBAM_031430___gntK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06143___gntK
# 2: RBAM_031430___gntK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity:     277/522 (53.1%)
# Similarity:   373/522 (71.5%)
# Gaps:          17/522 ( 3.3%)
# Score: 1431.0
# 
#
#=======================================

BSNT_06143___      1 --MTSYMLGIDIGTTSTKAVLFSENGDVVQKESIGYPLYTPDISTAEQNP     48
                       .|..::|:||||||||||||...|.|:.|.|:.|.|..|..:.|||:|
RBAM_031430__      1 MKETQAVIGLDIGTTSTKAVLFGPRGKVLAKHSVHYDLIQPKPAWAEQDP     50

BSNT_06143___     49 EEIFQAVIHT-TARITKQ--HPEKQISFISFSSAMHSVIAIDENDKPLTP     95
                     |.|.:|||.: ...:||.  .|:..:: |..|:||||:||:|:|...||.
RBAM_031430__     51 EHILEAVIGSIRGAVTKAGLSPDNLLA-IGISTAMHSLIAVDQNGGLLTK     99

BSNT_06143___     96 CITWADNRSEGWAHKIKEELNGHEVYKRTGTPIHPMAPLSKIAWITNERK    145
                     .|.||||||...:.:|.:|:||.::|||||||||||:|||||.|:..:.|
RBAM_031430__    100 SIIWADNRSAEQSKRILKEMNGFDIYKRTGTPIHPMSPLSKIVWMKEQDK    149

BSNT_06143___    146 EIASKAKKYIGIKEYIFKQLFNEYVIDYSLASATGMMNLKGLDWDEEALR    195
                     |..:|..|:|.|||||..:.|..||:|||:|||||:..|..|.|||||||
RBAM_031430__    150 ETFAKTAKFISIKEYILHEFFGTYVVDYSIASATGLFRLDTLSWDEEALR    199

BSNT_06143___    196 IAGITPDHLSKLVPTTQIFQHCSTEIAIQMGIDPETPFVIGASDGVLSNL    245
                     ||||..|.||.:||||...:..:.|||.:|||..:|||:|||:||||:||
RBAM_031430__    200 IAGIREDQLSDIVPTTHQLRGLAPEIAARMGIHADTPFIIGANDGVLANL    249

BSNT_06143___    246 GVNAIKKGEIAVTIGTSGAIRTIIDKPQTDEKGRIFCYALTDKHWVIGGP    295
                     ||.||.|||:|||||||||:|::.|.|.||||.|.|||||||||||||||
RBAM_031430__    250 GVGAIGKGEVAVTIGTSGAVRSVTDAPITDEKARTFCYALTDKHWVIGGP    299

BSNT_06143___    296 VNNGGIVLRWIRDEFASSEIETATRLGIDPYDVLTKIAQRVRPGSDGLLF    345
                     .|||||:|||:||||||.|:|||.||||||||::..||.:|..||:||||
RBAM_031430__    300 TNNGGIMLRWLRDEFASPEVETAKRLGIDPYDLMIDIADKVPAGSEGLLF    349

BSNT_06143___    346 HPYLAGERAPLWNPDVRGSFFGLTMSHKKEHMIRAALEGVIYNLYTVFLA    395
                     .|:|:|||||.|||:.||:|||:::.||:||.|||.|||||.:::::.:|
RBAM_031430__    350 LPFLSGERAPFWNPNARGTFFGISLRHKREHFIRAVLEGVIMSVFSIGVA    399

BSNT_06143___    396 LTECMDGPVTRIQATGGFARSEVWRQMMSDIFESEVVVPESYESSCLGAC    445
                     |.: :.||...::|:||||||.:|||::||....||:||||||:|.|||.
RBAM_031430__    400 LRD-LAGPAKDVRASGGFARSPLWRQILSDTMGREVLVPESYEASALGAA    448

BSNT_06143___    446 ILGLYATGKIDSFDAVSDMIGSTYRHTPIEDSAKEYRTLMPIFINLSRLL    495
                     :|.|::.|:::..:.|.|.|..::||.|...:::.|..|..::..|...|
RBAM_031430__    449 VLALHSLGEMERIEDVQDWIRISHRHEPNVKNSETYIELFYLYERLYDKL    498

BSNT_06143___    496 ENQYTQIADYQ----RGLITHK    513
                     ::::..|:::|    |      
RBAM_031430__    499 KDEFDVISEFQLKQSR------    514


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