Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06143 and RBAM_031430
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:37
# Commandline: needle
# -asequence dna-align/BSNT_06143___gntK.1.9828.seq
# -bsequence dna-align/RBAM_031430___gntK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06143___gntK-RBAM_031430___gntK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06143___gntK-RBAM_031430___gntK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06143___gntK
# 2: RBAM_031430___gntK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1726
# Identity: 1008/1726 (58.4%)
# Similarity: 1008/1726 (58.4%)
# Gaps: 365/1726 (21.1%)
# Score: 2651.0
#
#
#=======================================
BSNT_06143___ 1 ATGA--------CTAGTTATATGTTA--GGAATCGATATCGGCACGACAA 40
|||| |.|| .||||| ||..|.||||||||||||||.|
RBAM_031430__ 1 ATGAAGGAAACCCAAG----CTGTTATCGGTCTGGATATCGGCACGACCA 46
BSNT_06143___ 41 GCACAAAAGCTGTGCTGTTCAGTGAAAACGGAGATGTGGTA--CAGAAAG 88
|.||.|||||.||.||||||.|...||..||..|.|||.|| |
RBAM_031430__ 47 GTACGAAAGCCGTTCTGTTCGGACCAAGAGGCAAAGTGTTAGCC------ 90
BSNT_06143___ 89 AAAGCA-TCGGCTACCCGCTCT------ATACA-------CCGGACAT-- 122
||||| ||||.| |.||.| ||||| |||| |||
RBAM_031430__ 91 -AAGCATTCGGTT---CACTATGATTTGATACAGCCAAAGCCGG-CATGG 135
BSNT_06143___ 123 -CTCAACAG----CTGAACAAAACCCGGAAGAGATATTTCAGGCAGTCAT 167
|..|.||| ||||.||.|..|.|||||.|.| |.|| ||.||
RBAM_031430__ 136 GCCGAGCAGGATCCTGAGCACATTCTGGAAGCGGT-TATC-GGAAG---- 179
BSNT_06143___ 168 CCATACAACAG------CGAGAATTACAAA------AC--AGCATCCCGA 203
||.||| || |.||||| || ||| ||.||
RBAM_031430__ 180 -----CATCAGGGGCGCCG----TCACAAAGGCCGGACTGAGC--CCTGA 218
BSNT_06143___ 204 AAAACAGATCT-CTTTCATTTCG--TTCAGCAGCGCCATGCACAGCGTCA 250
.| |||| |||.|| .||| .||||||.|||||||||| |||
RBAM_031430__ 219 CA-----ATCTGCTTGCA-ATCGGCATCAGCACCGCCATGCAC----TCA 258
BSNT_06143___ 251 TT----GCAATCGACGAAAATGACAAGCC-GCTGACGCCATGCATCACAT 295
|| ||..||||..||||.|.| .||| ||||||...|.||||||..|
RBAM_031430__ 259 TTGATAGCTGTCGATCAAAACGGC-GGCCTGCTGACCAAAAGCATCATTT 307
BSNT_06143___ 296 GGGCCGACAACCGAAGTGAAGGCTGGGC--GCATAA--GATCAAAGAGGA 341
||||.||||||||.|| .||.|.|| .||.|| |||...|.|.||
RBAM_031430__ 308 GGGCGGACAACCGCAG----CGCCGAGCAATCAAAACGGATTTTAAAAGA 353
BSNT_06143___ 342 ATTGAACGGACATGAGGTGTACAAACGTACGGGAACACCGATTCATCCGA 391
|.|||||||...|||..|.||.|||.|.|||||.||.||||||||.||||
RBAM_031430__ 354 AATGAACGGTTTTGATATTTATAAAAGAACGGGTACGCCGATTCACCCGA 403
BSNT_06143___ 392 TGGCACCGTTAAGTAAAATTGCCTGGATCACGAATGAAAGAAAAGAAATC 441
||.|.|||.|....|||||||..||| |||||||||.||.|
RBAM_031430__ 404 TGTCTCCGCTTTCCAAAATTGTGTGG-------ATGAAAGAACAGGA--- 443
BSNT_06143___ 442 GCTTCCAAGG----------CAAAA-----AAATATATCGGCATCAAAGA 476
.|||| .|||| ||||..|||.|.||.|||||
RBAM_031430__ 444 -----TAAGGAGACATTCGCGAAAACCGCCAAATTCATCAGTATTAAAGA 488
BSNT_06143___ 477 ATACATTTTTAAACAGCTGTTC---AATGAGTATGTCATCGATTACTCCT 523
|||.|||.|..|..||.|.||| |.| ||||||.|||||||.||..
RBAM_031430__ 489 ATATATTCTGCACGAGTTTTTCGGAACT---TATGTCGTCGATTATTCGA 535
BSNT_06143___ 524 TGGCATCAGCGACAGGCATGATGAACCTGAAAGGCTTGGAT--------- 564
|.||.||.||.||.|| |.||..|| |.||.|||
RBAM_031430__ 536 TCGCTTCGGCAACGGG---GCTGTTCC------GTTTAGATACGCTTTCC 576
BSNT_06143___ 565 TGGGACGAAGAGGCACTGCGCATCGCAGGCATCACGCCG----GATCACT 610
|||||.|||||.||.||.||.||.||.||.|| ||| |||||..
RBAM_031430__ 577 TGGGATGAAGAAGCGCTCCGGATTGCCGGAAT----CCGGGAAGATCAGC 622
BSNT_06143___ 611 TATCCAAACTCGTGCCGACAACCCAGATCTTTCAGCACTGCAGC------ 654
|.||..|..||||||||||.||.|| |||||...||.||
RBAM_031430__ 623 TGTCGGACATCGTGCCGACCACTCA------TCAGCTGCGCGGCCTTGCG 666
BSNT_06143___ 655 ACGGAAATAGCGATCCA--AATGGGAATCGATCCGGAAACGCCTTTTGTC 702
.||||||| ||.|.|| .|||||.||..||.||||.||.||.|||.|.
RBAM_031430__ 667 CCGGAAAT--CGCTGCACGGATGGGCATTCATGCGGATACACCGTTTATT 714
BSNT_06143___ 703 ATCGGCGCCAGCGACGGCGTGCTGTCCAACCTCGGCGTCAACGCCATTAA 752
||||||||.|..|||||||||||..|||||||.||.|||..|||.|||..
RBAM_031430__ 715 ATCGGCGCAAATGACGGCGTGCTCGCCAACCTTGGAGTCGGCGCGATTGG 764
BSNT_06143___ 753 AAAGGGCGAAATCGCCGTCACCATCGGAACAAGCGGTGCCATCCGGACGA 802
.||.||||||.|.|||||.||.||||||||||||||.|||.|.||..||.
RBAM_031430__ 765 CAAAGGCGAAGTGGCCGTTACGATCGGAACAAGCGGAGCCGTGCGTTCGG 814
BSNT_06143___ 803 TTATTGACAAGCCGCAAACCGATGAAAAAGGGAGAATTTTTTGCTATGCC 852
|.|..||...||||...||.||||||||||.|.|.|..||.||.||.||.
RBAM_031430__ 815 TGACGGATGCGCCGATTACGGATGAAAAAGCGCGGACATTCTGTTACGCG 864
BSNT_06143___ 853 TTGACGGACAAGCATTGGGTTATTGGGGGACCTGTGAACAATGGGGGCAT 902
.||||.||||||||||||||.||.||.||.||...|||.||.||.|||||
RBAM_031430__ 865 CTGACTGACAAGCATTGGGTCATCGGAGGCCCGACGAATAACGGAGGCAT 914
BSNT_06143___ 903 CGTCCTTCGCTGGATCAGAGACGAGTTTGCCTCCTCC-GAAATCGAAACA 951
..|.||.||||||.|..|||||||.||.| ||.|||| |||.|||||||.
RBAM_031430__ 915 TATGCTGCGCTGGCTTCGAGACGAATTCG-CTTCTCCGGAAGTCGAAACG 963
BSNT_06143___ 952 GCGACACGGCTGGGCATTGATCCATATGACGT-------------GCTGA 988
||||..|||||.|||||||||||.|||||..| |||||
RBAM_031430__ 964 GCGAAGCGGCTCGGCATTGATCCGTATGATTTAATGATTGATATCGCTGA 1013
BSNT_06143___ 989 CGAAAATTGCCCAACGCGTCAGACCCGGTTCTGACGGTCTGCTGTTCCAC 1038
.|||.||||| .|.||.|||||.||..|||||||.|..
RBAM_031430__ 1014 --TAAAGTGCCC-----------GCAGGCTCTGAGGGATTGCTGTTTCTG 1050
BSNT_06143___ 1039 CCATATCTCGCCGGAGAACGCGCTCCGTTGTGGAATCCGGATGTACGCGG 1088
||.|.|.|..|.||.||.|||||.|||||.|||||||||.|||..|||||
RBAM_031430__ 1051 CCGTTTTTATCAGGGGAGCGCGCGCCGTTTTGGAATCCGAATGCCCGCGG 1100
BSNT_06143___ 1089 CTCATTTTTCGGCCTGACCATGTCG-CATAAGAAAGAGCATATGATACGC 1137
..|.|||||||||.|.|.|.| .|| |||||....||||||.|.||..|.
RBAM_031430__ 1101 AACGTTTTTCGGCATCAGCCT-CCGCCATAAACGGGAGCATTTTATCAGA 1149
BSNT_06143___ 1138 GCGGCATTGGAAGGCGTCA-----------TTTACAACCTGTACACGGTG 1176
||||...|||||||||||| |||.||| .|||||
RBAM_031430__ 1150 GCGGTGCTGGAAGGCGTCATCATGAGCGTCTTTTCAA-------TCGGTG 1192
BSNT_06143___ 1177 TTCTTGGCGTTAACTGA---ATGCATGGATGGCCCGGTAACCCGCA---- 1219
| || .||||| || .|||..||| ||||||
RBAM_031430__ 1193 T------CG--CACTGAGAGAT--TTGGCGGGC-------CCCGCAAAAG 1225
BSNT_06143___ 1220 ---TCCAAGCAACAGGGGGATTTGCAAGGTCGGAGGTTTGGCGCCAAATG 1266
|.|..||..|.||.||||||||.||.|||..|.|.|||.|.||.||.
RBAM_031430__ 1226 ACGTGCGGGCTTCGGGAGGATTTGCGAGATCGCCGCTGTGGAGGCAGATT 1275
BSNT_06143___ 1267 ATGTCGGATATCTTCGA----ATCAGAGGTTGTCGTTCCGGAAAGCTACG 1312
.||||.|||| ||| |...||.||..|||||||||||||.||||
RBAM_031430__ 1276 TTGTCCGATA----CGATGGGACGGGAAGTCCTCGTTCCGGAAAGTTACG 1321
BSNT_06143___ 1313 AAAGCTCATGTCTCGGCGC------CTGCATTTTAGGCCTGTATGCAACA 1356
|| |.|||||||| |.||..||...|| |.||| |||
RBAM_031430__ 1322 AA-------GCCTCGGCGCTCGGAGCGGCCGTTCTCGC---TTTGC-ACA 1360
BSNT_06143___ 1357 G-------GAAA---AATTGACTCTTTCGACGCCGTGTCC--GACATGAT 1394
| |||| ||..|| ||||.| .|||.| |||..|||
RBAM_031430__ 1361 GCCTTGGCGAAATGGAACGGA-----TCGAGG--ATGTTCAGGACTGGAT 1403
BSNT_06143___ 1395 CGGCAGCACATACAGACATACGCCGATCGAAGACTCAGCCAAGGAATACA 1444
|.|.|...|..||.|.|||...||||.|| ||| ||.|||
RBAM_031430__ 1404 CAGAATTTCTCACCGCCATGAACCGAACG-----TCA-------AAAACA 1441
BSNT_06143___ 1445 G---AACATTAAT---GCCGATTTTCATCAA--------TCTAT--CAAG 1478
| |||||..|| ||.|.|||.|.|..| |.||| ||||
RBAM_031430__ 1442 GCGAAACATATATTGAGCTGTTTTACTTATACGAGCGGCTGTATGACAAG 1491
BSNT_06143___ 1479 ATTATTAGAAAATCAATATACACAAATTGCAGATTATCAGAGGGGCTTAA 1528
.|.| ||.||.||| ||| |..|.||||| |.||
RBAM_031430__ 1492 CTCA----AAGATGAAT---------TTG-ACGTCATCAG------TGAA 1521
BSNT_06143___ 1529 T-----CACACACAAATAG------- 1542
| |.||.|||| ||
RBAM_031430__ 1522 TTTCAGCTCAAACAA--AGCCGTTAA 1545
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.