Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01794 and RBAM_031390

See DNA alignment / Visit BSNT_01794 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence pep-align/BSNT_01794___yhjM.1.9828.seq
#    -bsequence pep-align/RBAM_031390.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01794___yhjM-RBAM_031390.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01794___yhjM-RBAM_031390.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01794___yhjM
# 2: RBAM_031390
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     139/332 (41.9%)
# Similarity:   193/332 (58.1%)
# Gaps:          11/332 ( 3.3%)
# Score: 619.5
# 
#
#=======================================

BSNT_01794___      1 MPTIDEIAKLCNVSKTTVSRVLNNHPYVSKEKRDMILKAINELDYTPNYL     50
                     |..|.||||..|||:|||||||||||||..||||.:|||:.||:|.||:.
RBAM_031390        1 MTNITEIAKKANVSRTTVSRVLNNHPYVKPEKRDAVLKAMKELNYVPNFN     50

BSNT_01794___     51 ARNFRRNKTQTIALSVPSIDHPFFAQLIKGVSHEALFKNYKVIVFQTFYD    100
                     |.|..|.||....:.||.|:||||::||.|:..|....||.::|.|:..|
RBAM_031390       51 AINLSRGKTNVFGVIVPKINHPFFSKLIAGIGEECNKHNYSLLVHQSNND    100

BSNT_01794___    101 KQTELELLELLKHKEVDGIILGTL---ENEWDQISPFLKYGPILLCNEYH    147
                     .:.|:|....||:|.:||:|||:.   .:..|:||.|   |.|:.| |..
RBAM_031390      101 PEQEMEFFNRLKYKLIDGLILGSCISPHHVLDEISEF---GNIVSC-EAS    146

BSNT_01794___    148 HSADITIIGYDEFEATYMGVVHLIERGHKKIGFCFDTPYSEAQCQRKEGY    197
                     .|..:..|..:......|.:.||..:||:.||.|...|.|.....||:.:
RBAM_031390      147 ASKQVAHIFINHESGIKMAIDHLRNQGHQSIGLCIGNPKSGVGISRKKSF    196

BSNT_01794___    198 LKALQDYDLHHRSEWIFGEMFNIEDGFRVFHKIKDLKDRPSAIFTGNDQV    247
                     .....:|.|.....|.|.|.:.||:|..:...:.:...||:|:..|:|.|
RBAM_031390      197 FHFRNEYGLKWSDNWYFEEQYTIENGIEIAKLLLNKSPRPAAMVVGSDYV    246

BSNT_01794___    248 AAGIIKQAMKNGFKVPEDLAVIGFDNQLICQVVTPTITTIDIPVIELGQQ    297
                     |||||.:|.:.|.::||:|||||||||.|.:|:  .::||..|:.||||.
RBAM_031390      247 AAGIIYEAKRQGIRIPEELAVIGFDNQPISKVI--ELSTIHQPIKELGQT    294

BSNT_01794___    298 AVLKIIESISGNATLNRRIIKLPTKLIIREST    329
                     |. .::.::..|..: ..|.||..|||.|:||
RBAM_031390      295 AA-NLLYNLMNNKDV-PNINKLNLKLIKRKST    324


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