Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05141 and RBAM_031360

See DNA alignment / Visit BSNT_05141 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:37
# Commandline: needle
#    -asequence pep-align/BSNT_05141___yvbV.1.9828.seq
#    -bsequence pep-align/RBAM_031360___yvbV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05141___yvbV-RBAM_031360___yvbV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05141___yvbV-RBAM_031360___yvbV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05141___yvbV
# 2: RBAM_031360___yvbV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     248/305 (81.3%)
# Similarity:   272/305 (89.2%)
# Gaps:           0/305 ( 0.0%)
# Score: 1272.0
# 
#
#=======================================

BSNT_05141___      1 MKQLSKTRTALLLAFLVIMWGVNWPLSKAALAYSPPLLFAGIRTLIGGLL     50
                     ||||||.:|||:|||||.:||:||||:|||||||||||||||||||||||
RBAM_031360__      1 MKQLSKIQTALMLAFLVTVWGINWPLTKAALAYSPPLLFAGIRTLIGGLL     50

BSNT_05141___     51 LVIVALPRIHKLRLKETWPIYLVSALLNITLFYGLQTIGLNYLPAGLFSA    100
                     |::|||||..|||.||||||||:||:|||||||||||:||||||||||||
RBAM_031360__     51 LLMVALPRFKKLRFKETWPIYLISAILNITLFYGLQTVGLNYLPAGLFSA    100

BSNT_05141___    101 IVFFQPVLMGVFSWLWLGESMFVMKVIGLILGFAGVAVISAAGFGGHISV    150
                     |||||||||||||||||||||:.:|:.||||||||||||||||||||||:
RBAM_031360__    101 IVFFQPVLMGVFSWLWLGESMYPLKIAGLILGFAGVAVISAAGFGGHISI    150

BSNT_05141___    151 IGILLALGSAISWALGTVYMKKTGSRVDSIWMVALQLTIGSVFLLISGFW    200
                     .|||||||||:||||||||:|:||.|.|:||||||||.||.|.|:.||.:
RBAM_031360__    151 AGILLALGSAVSWALGTVYVKRTGGRADAIWMVALQLLIGGVLLVSSGHF    200

BSNT_05141___    201 TESFSAIQWTAPFITSLLFISVFVIALGWLVFFTLVGSGEASKVASYTFL    250
                     :||||||||.||||.|||||||||||||||.|||||||||||||||||||
RBAM_031360__    201 SESFSAIQWKAPFILSLLFISVFVIALGWLAFFTLVGSGEASKVASYTFL    250

BSNT_05141___    251 IPLISIVASSIFLHEPLTLSLLAGLLLIVTSICLVNTKSKAQKAAAIGIN    300
                     ||||||..||||||||||:||||||||||||||.||...|..|..|:...
RBAM_031360__    251 IPLISITVSSIFLHEPLTVSLLAGLLLIVTSICFVNITPKKLKTPALAAE    300

BSNT_05141___    301 EKAAQ    305
                     :||..
RBAM_031360__    301 KKAVH    305


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