Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05139 and RBAM_031340

See DNA alignment / Visit BSNT_05139 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:37
# Commandline: needle
#    -asequence pep-align/BSNT_05139___yvbT.1.9828.seq
#    -bsequence pep-align/RBAM_031340___yvbT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05139___yvbT-RBAM_031340___yvbT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05139___yvbT-RBAM_031340___yvbT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05139___yvbT
# 2: RBAM_031340___yvbT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     308/336 (91.7%)
# Similarity:   324/336 (96.4%)
# Gaps:           1/336 ( 0.3%)
# Score: 1609.0
# 
#
#=======================================

BSNT_05139___      1 MSNNQRKDTLLSVLNLSPVVQGGTIAESFRNSMDLARRAEEWGYHRYWLA     50
                     |:.:..|||..|||||||||||||:|||||||||||||||||||:|||||
RBAM_031340__      1 MAEHTLKDTAFSVLNLSPVVQGGTVAESFRNSMDLARRAEEWGYNRYWLA     50

BSNT_05139___     51 EHHNIEGVASSATAVLIGHIAGGTKKIRVGSGGIMLPNHSSLVIAEQFGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031340__     51 EHHNIEGVASSATAVLIGHIAGGTKKIRVGSGGIMLPNHSSLVIAEQFGT    100

BSNT_05139___    101 LETLYPGRIDLGLGRAPGTDQLTARALRRNINSGEDFPEQLEELRNYFKP    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031340__    101 LETLYPGRIDLGLGRAPGTDQLTARALRRNINSGEDFPEQLEELRNYFKP    150

BSNT_05139___    151 SGNVRNQVRAIPGEGIDVPIWLLGSSGFSARLAGELGLPFAFAAHFSPAN    200
                     |||||||||||||||:||||||||||||||||||||||||||||||||.|
RBAM_031340__    151 SGNVRNQVRAIPGEGLDVPIWLLGSSGFSARLAGELGLPFAFAAHFSPKN    200

BSNT_05139___    201 TVPALELYRNSFTPSDVLDEPYAMVGVTIIAADTNEKAQHLATSHYQRFL    250
                     |||||||||:||.||||||:||||||||:|||||:|||:|||||||||||
RBAM_031340__    201 TVPALELYRSSFRPSDVLDQPYAMVGVTVIAADTDEKAEHLATSHYQRFL    250

BSNT_05139___    251 DLVRGTPNQLKPPVEDMDQIWSPYEKAMVNEQLSSTIVGGPEEVKAKLED    300
                     ||||||||||||||||||||||||||||||||||||||||||.||.|||.
RBAM_031340__    251 DLVRGTPNQLKPPVEDMDQIWSPYEKAMVNEQLSSTIVGGPERVKEKLES    300

BSNT_05139___    301 FVKTTQADEIMVNSETFEHADRMRSFEIIADVWNNR    336
                     |::||||||||||||:||||||||||||||::.|: 
RBAM_031340__    301 FIRTTQADEIMVNSESFEHADRMRSFEIIAELKNS-    335


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