Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05133 and RBAM_031290
See
DNA alignment /
Visit
BSNT_05133 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence pep-align/BSNT_05133___pgk.1.9828.seq
# -bsequence pep-align/RBAM_031290___pgk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05133___pgk-RBAM_031290___pgk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05133___pgk-RBAM_031290___pgk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05133___pgk
# 2: RBAM_031290___pgk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 394
# Identity: 385/394 (97.7%)
# Similarity: 392/394 (99.5%)
# Gaps: 0/394 ( 0.0%)
# Score: 1947.0
#
#
#=======================================
BSNT_05133___ 1 MNKKTLKDIDVKGKVVFCRVDFNVPMKDGEVTDDTRIRAALPTIKHLADQ 50
|||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_031290__ 1 MNKKTVKDIDVKGKVVFCRVDFNVPMKDGEVTDDTRIRAALPTIKHLADQ 50
BSNT_05133___ 51 GAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVK 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031290__ 51 GAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVK 100
BSNT_05133___ 101 AQISEMKDGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAH 150
||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_031290__ 101 AQISDMKDGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAH 150
BSNT_05133___ 151 RAHASTAGIAEHLPAVAGFLMEKELDVLGKAVSNPDRPFTAIIGGAKVKD 200
||||||||||||||||||||||||||||||||:||:||||||||||||||
RBAM_031290__ 151 RAHASTAGIAEHLPAVAGFLMEKELDVLGKAVTNPERPFTAIIGGAKVKD 200
BSNT_05133___ 201 KIGVIESLLDKVDNLIIGGGLAYTFVKALGYEVGKSLLEEDKIELAKSFM 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031290__ 201 KIGVIESLLDKVDNLIIGGGLAYTFVKALGYEVGKSLLEEDKIELAKSFM 250
BSNT_05133___ 251 DRAKEKGVNFYMPEDVLVADDFSNDANVKIVPISEIPSDLEAIDIGTKTR 300
||||||||.|||||||||||||||||||:|||:|||||||||||||||||
RBAM_031290__ 251 DRAKEKGVKFYMPEDVLVADDFSNDANVQIVPVSEIPSDLEAIDIGTKTR 300
BSNT_05133___ 301 ETYADVIKNSKLVVWNGPMGVFEIDLFAQGTKAVAEALAEAKDTYSVIGG 350
||||:||||||||||||||||||||||||||||||||||||.||||||||
RBAM_031290__ 301 ETYAEVIKNSKLVVWNGPMGVFEIDLFAQGTKAVAEALAEANDTYSVIGG 350
BSNT_05133___ 351 GDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVAALNDK 394
||||||||||||||||||||||||||||||||||||||||||||
RBAM_031290__ 351 GDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVAALNDK 394
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.