Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05133 and RBAM_031290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence dna-align/BSNT_05133___pgk.1.9828.seq
# -bsequence dna-align/RBAM_031290___pgk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05133___pgk-RBAM_031290___pgk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05133___pgk-RBAM_031290___pgk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05133___pgk
# 2: RBAM_031290___pgk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1185
# Identity: 1102/1185 (93.0%)
# Similarity: 1102/1185 (93.0%)
# Gaps: 0/1185 ( 0.0%)
# Score: 5178.0
#
#
#=======================================
BSNT_05133___ 1 ATGAATAAAAAAACTCTCAAAGACATCGACGTAAAAGGCAAAGTTGTATT 50
||||||||||||||..|.||||||||||||||||||||||||||.|||||
RBAM_031290__ 1 ATGAATAAAAAAACAGTAAAAGACATCGACGTAAAAGGCAAAGTCGTATT 50
BSNT_05133___ 51 CTGCCGCGTCGACTTTAACGTTCCAATGAAAGACGGGGAAGTAACAGACG 100
|||||||||.||||||||||||||||||||||||||||||||||||||||
RBAM_031290__ 51 CTGCCGCGTTGACTTTAACGTTCCAATGAAAGACGGGGAAGTAACAGACG 100
BSNT_05133___ 101 ATACACGTATCCGTGCTGCGCTTCCAACAATCAAACACCTTGCAGACCAA 150
||||.||||||||.||||||||||||||||||||||||||||||||||||
RBAM_031290__ 101 ATACTCGTATCCGCGCTGCGCTTCCAACAATCAAACACCTTGCAGACCAA 150
BSNT_05133___ 151 GGCGCGAAAGTCCTTCTTGCGAGCCACTTAGGCCGCCCGAAAGGCGAAGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031290__ 151 GGCGCGAAAGTCCTTCTTGCGAGCCACTTAGGCCGCCCGAAAGGCGAAGT 200
BSNT_05133___ 201 GGTTGAGGAGCTTCGTTTAACTCCTGTCGCTGCACGTCTCGGCGAACTGC 250
||||||||||||||||||||||||||||||||||||..|.||||||||||
RBAM_031290__ 201 GGTTGAGGAGCTTCGTTTAACTCCTGTCGCTGCACGCTTAGGCGAACTGC 250
BSNT_05133___ 251 TTGGAAAAGAAGTGAAAAAAGCGGATGAAGCATACGGCGATGCTGTAAAA 300
|.||.||||||||||||||||||||||||||.||||||||||||||||||
RBAM_031290__ 251 TCGGCAAAGAAGTGAAAAAAGCGGATGAAGCTTACGGCGATGCTGTAAAA 300
BSNT_05133___ 301 GCACAAATTTCCGAGATGAAGGACGGAGACGTTCTTGTATTGGAAAACGT 350
|||||||||||.||.|||||||||||||||||||||||||||||||||||
RBAM_031290__ 301 GCACAAATTTCTGATATGAAGGACGGAGACGTTCTTGTATTGGAAAACGT 350
BSNT_05133___ 351 ACGTTTCTATCCTGGTGAAGAGAAAAATGACCCTGAACTTGCAAAAGCAT 400
|||||||||.|||||||||||||||||.||.|||||.|||||.|||||||
RBAM_031290__ 351 ACGTTTCTACCCTGGTGAAGAGAAAAACGATCCTGAGCTTGCTAAAGCAT 400
BSNT_05133___ 401 TTGCTGAGCTTGCAGATGTATATGTAAATGACGCATTCGGTGCTGCCCAC 450
|||||||||||||.|||||||||||.||||||||||||||||||||||||
RBAM_031290__ 401 TTGCTGAGCTTGCGGATGTATATGTCAATGACGCATTCGGTGCTGCCCAC 450
BSNT_05133___ 451 CGTGCTCACGCATCTACAGCTGGAATTGCCGAGCATCTGCCAGCAGTTGC 500
||||||||||||||||||||.||||||||||||||||||||.||.|||||
RBAM_031290__ 451 CGTGCTCACGCATCTACAGCCGGAATTGCCGAGCATCTGCCGGCGGTTGC 500
BSNT_05133___ 501 AGGTTTCTTAATGGAAAAAGAGCTTGATGTACTTGGAAAAGCGGTTTCCA 550
|||.|||.|.|||||||||||||||||.||.||.||.|||||.||..|.|
RBAM_031290__ 501 AGGATTCCTGATGGAAAAAGAGCTTGACGTTCTCGGCAAAGCCGTGACAA 550
BSNT_05133___ 551 ATCCTGACCGCCCGTTCACAGCGATCATCGGCGGAGCGAAAGTAAAAGAC 600
|||||||.||||||||.||.||.|||||||||||.|||||||||||||||
RBAM_031290__ 551 ATCCTGAGCGCCCGTTTACGGCAATCATCGGCGGCGCGAAAGTAAAAGAC 600
BSNT_05133___ 601 AAAATCGGTGTAATCGAAAGTCTTCTTGATAAAGTAGACAACCTGATCAT 650
|||||||||||||||||||||||.|||||||||||.||||||||||||||
RBAM_031290__ 601 AAAATCGGTGTAATCGAAAGTCTGCTTGATAAAGTGGACAACCTGATCAT 650
BSNT_05133___ 651 CGGCGGAGGTCTTGCTTATACTTTCGTAAAAGCGCTTGGCTATGAAGTCG 700
||||||||||||||||||.||.|||||||||||||||||.||||||||||
RBAM_031290__ 651 CGGCGGAGGTCTTGCTTACACATTCGTAAAAGCGCTTGGTTATGAAGTCG 700
BSNT_05133___ 701 GTAAATCTCTTCTTGAAGAGGATAAAATCGAGCTTGCGAAATCATTTATG 750
|||||||||||||||||||.|||||||||||.|||||.||||||||.|||
RBAM_031290__ 701 GTAAATCTCTTCTTGAAGAAGATAAAATCGAACTTGCAAAATCATTCATG 750
BSNT_05133___ 751 GACCGCGCTAAAGAAAAAGGCGTTAACTTCTACATGCCTGAAGATGTACT 800
||||||||.|||||||||||||||||.|||||.|||||.|||||.||.||
RBAM_031290__ 751 GACCGCGCGAAAGAAAAAGGCGTTAAATTCTATATGCCGGAAGACGTTCT 800
BSNT_05133___ 801 CGTTGCAGATGATTTCTCTAACGATGCAAACGTGAAAATTGTGCCGATCT 850
||||||.||||||||||||||||||||||||||..||||.||||||.|||
RBAM_031290__ 801 CGTTGCTGATGATTTCTCTAACGATGCAAACGTTCAAATCGTGCCGGTCT 850
BSNT_05133___ 851 CTGAAATCCCTAGTGATTTAGAAGCAATCGACATTGGTACGAAAACACGC 900
||||.|||||.||||||||||||||.||||||||.||.||||||||.|||
RBAM_031290__ 851 CTGAGATCCCAAGTGATTTAGAAGCGATCGACATCGGAACGAAAACCCGC 900
BSNT_05133___ 901 GAAACGTATGCTGACGTCATCAAAAACAGCAAACTTGTCGTGTGGAACGG 950
||||||||||||||.||.|||||||||||||||||||||||.||||||||
RBAM_031290__ 901 GAAACGTATGCTGAAGTTATCAAAAACAGCAAACTTGTCGTATGGAACGG 950
BSNT_05133___ 951 ACCAATGGGCGTATTCGAAATCGACTTGTTCGCTCAAGGAACAAAAGCGG 1000
|||.|||||||||||||||||||||||||||||||||||.||||||||.|
RBAM_031290__ 951 ACCGATGGGCGTATTCGAAATCGACTTGTTCGCTCAAGGCACAAAAGCAG 1000
BSNT_05133___ 1001 TTGCGGAAGCATTGGCAGAGGCGAAAGATACATACTCTGTCATCGGCGGA 1050
|.||.|||||||||||||||||.||.||||||||||||||||||||||||
RBAM_031290__ 1001 TGGCTGAAGCATTGGCAGAGGCAAACGATACATACTCTGTCATCGGCGGA 1050
BSNT_05133___ 1051 GGAGACTCTGCGGCAGCGGTTGAAAAATTCGGCCTTGCTGACAAAATGAG 1100
|||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_031290__ 1051 GGAGACTCTGCGGCAGCCGTTGAAAAATTCGGCCTTGCTGACAAAATGAG 1100
BSNT_05133___ 1101 CCACATCTCAACAGGCGGCGGCGCATCCCTTGAGTTTATGGAAGGCAAAG 1150
|||.|||||||||||||||||||||||||||||.||.|||||||||||||
RBAM_031290__ 1101 CCATATCTCAACAGGCGGCGGCGCATCCCTTGAATTCATGGAAGGCAAAG 1150
BSNT_05133___ 1151 AGCTTCCAGGGGTAGCTGCACTGAACGATAAATAA 1185
||||||||||.||||||||.|||||||||||||||
RBAM_031290__ 1151 AGCTTCCAGGTGTAGCTGCGCTGAACGATAAATAA 1185
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