Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05883 and RBAM_031250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:23
# Commandline: needle
# -asequence pep-align/BSNT_05883___ywaD.1.9828.seq
# -bsequence pep-align/RBAM_031250___ywaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05883___ywaD-RBAM_031250___ywaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05883___ywaD-RBAM_031250___ywaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05883___ywaD
# 2: RBAM_031250___ywaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity: 200/471 (42.5%)
# Similarity: 271/471 (57.5%)
# Gaps: 53/471 (11.3%)
# Score: 903.5
#
#
#=======================================
BSNT_05883___ 1 MKKLLTVMTMAVLTAGTLLLPAQSVTPAAHAVQISNSERELPFKAKHAYS 50
:|..|.:::.. |...||.|..:.......|....||||
RBAM_031250__ 1 -----------MLIRGGIMMKF-SFMSAAVAASVIWGASAGPLSETHAYS 38
BSNT_05883___ 51 --------------TISQLSEAIGPRIAGTAAEKKSALLIASSMRKLKLD 86
|:..|||.||||..|||.||::|..|::.:|.....
RBAM_031250__ 39 AVTAPVFDADEALDTMHDLSETIGPRETGTAKEKEAAEYISNRLRAQGAS 88
BSNT_05883___ 87 VKVQRFDIPDRLEGTLSSAGRDILLQAASGSAPTEEQGLTAPLYNAGLGY 136
||||.|.:.....|::::...:..|::|..||..:|..:...:::.|.|.
RBAM_031250__ 89 VKVQSFPLKKYFSGSVTAGDHEFPLRSADQSAVEKELRIEGGIFDGGCGS 138
BSNT_05883___ 137 QKDFTADAKGKIALISRGDLTYYEKAKNAEAAGAKAVIIYNNKESLVPMT 186
:.|.|. ||||||:|..|.:...:|.|:||.||||||||||.....:.:.
RBAM_031250__ 139 RDDVTG-AKGKIAVIREGKIPVSQKIKHAEQAGAKAVIIYNQTTKPLAVR 187
BSNT_05883___ 187 PNLSGNKVGIPVVGIKKEDGEALTQQKEATLKLKAFTNQTSQNIIGIKK- 235
|: :...:.||..|:||||||||.|:|:|.::.|.:.|:|||||||.:|
RBAM_031250__ 188 PH-TDKGITIPAAGMKKEDGEALLQEKQAVIQFKNYKNRTSQNIIGTRKA 236
BSNT_05883___ 236 PK-NIKHPDIVYVTAHYDSVPFSPGANDNGSGTSVMLEMARVLKSVPSDK 284
|: |....||:|||||||||..:|||:||.||||.:||:::.|..:|.||
RBAM_031250__ 237 PQANSSDADIIYVTAHYDSVKGAPGADDNASGTSAVLEISKQLTHIPKDK 286
BSNT_05883___ 285 EIRFIAFGAEELGLLGSSHYVDHLSEKELKRSEVNFNLDMVGTSWEKASE 334
|||||.||||||...|||:||..|:..|.|.|:.|||.||:.|.||:||:
RBAM_031250__ 287 EIRFILFGAEELWSAGSSYYVSTLTNNERKHSQANFNADMIATDWEEASQ 336
BSNT_05883___ 335 LYVNTLDGQSNYVWESSHTAAEKIGFDSLSLTQGGSSDHVPFHEAGIDSA 384
:.|.|.||:.|.....:..||||......:|.|.|.||||.|:||||.||
RBAM_031250__ 337 MCVTTPDGKENPSVRYAEKAAEKSRLVKPNLIQLGYSDHVSFYEAGIPSA 386
BSNT_05883___ 385 NFIWGDPETEEVEPWYHTPEDSIEHISKERLQQAGDLVTAAVYEAVKREK 434
|:||..|:|:|..|||||..|:::|||||||::||.||:|||.||||.
RBAM_031250__ 387 NWIWLSPDTQEPGPWYHTENDNMKHISKERLEKAGSLVSAAVTEAVKE-- 434
BSNT_05883___ 435 KPKTIKKQMKAKATDIFEDIK 455
RBAM_031250__ 434 --------------------- 434
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