Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04490 and RBAM_031240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence pep-align/BSNT_04490___ytcA.1.9828.seq
# -bsequence pep-align/RBAM_031240.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04490___ytcA-RBAM_031240.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04490___ytcA-RBAM_031240.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04490___ytcA
# 2: RBAM_031240
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 470
# Identity: 120/470 (25.5%)
# Similarity: 198/470 (42.1%)
# Gaps: 68/470 (14.5%)
# Score: 331.0
#
#
#=======================================
BSNT_04490___ 1 ------------------------MKICVVGAGYVGLTLSAALASIGHDM 26
..:.|:|.||||..|:......|:::
RBAM_031240 1 MNTVTKEASNLGQKRLLHLIETKQAIVGVLGMGYVGFPLALECVDKGYNV 50
BSNT_04490___ 27 ICTDKDVKKIGQLKKGV--IPFYEPGLSDAILRCGNLSFSSEVKSSMEEC 74
|..||:.:|:..|..|. |...|....::.|:......|::: |.:::|
RBAM_031240 51 IGFDKNSEKVSLLAAGSSHIQDIEDDRLNSALQTKRFQISADM-SLIQKC 99
BSNT_04490___ 75 PVIFIAVGTP-PRSDGSADTKALQSVIGDLSESIRSYKTIITKSTVPPG- 122
.:|.|.|.|| .:.|...|...:.|.:..:....|.::.:|.:||..||
RBAM_031240 100 DIIVICVPTPLNKKDKIPDLTYIDSAVDSMIAYGRQHQLLILESTTYPGT 149
BSNT_04490___ 123 TNENIAKQLIAS---GVSRNLFNVVSNPEFLREGNALYDMLHPDKTVIGV 169
|.:.||.::.:| .:..:.|...| ||.:..||..|::....|.|.|.
RBAM_031240 150 TKKKIADRMASSRGMKIGTDFFTAYS-PERIDPGNRQYEVSDIPKVVGGT 198
BSNT_04490___ 170 QE--EDHVSA---AIVKSIYKHIDTPFIVTSLAGAELIKYANNFFLAAKI 214
.: .:..|| .||.||:. |||...||..|...|.:....|
RBAM_031240 199 TQTCTELASAFYSTIVTSIHP-------VTSPEVAETAKLLENTYRYVNI 241
BSNT_04490___ 215 SFINEMARICEAYQSDISDISRAIGLDPRIGKHFLQAGIGYGGSCFPKDL 264
:.|||||..|.....||.::..|....|...:.|: .|.|.||.|.|.|.
RBAM_031240 242 ALINEMALNCRELDIDIWEVICAADTKPFGFQKFI-PGPGVGGHCIPIDP 290
BSNT_04490___ 265 QALQFAAQEKNTETFLLRAVQHINDTQLGLYIKKIQSFFETLQGK-KAAV 313
...::.|.||..:|.|:.....||... ...:..:...|.|| |.::
RBAM_031240 291 FYFKWIANEKGLQTKLIDLADEINSNM----PISVSDYALKLAGKDKCSI 336
BSNT_04490___ 314 L--GISFKPNTDDIRNSQAVRLMERLAELGCDVHAYDP---EAVLPEHLR 358
| |.::|.||:|.|.|....:||.|.:.||.:..:|| |..|.:..|
RBAM_031240 337 LIIGAAYKKNTNDPRESSVFTIMEELMDKGCAIDYHDPFISEIRLNDGSR 386
BSNT_04490___ 359 QHVTQHSQAFDAIEESDFLFLATEWPEFLAFDWKKAADIMKGRLVIDGRN 408
:.....:: :.|.:.|.:.:.|:.. ..|:....|: ..::.|.||
RBAM_031240 387 KQSVPFTK--EQINQYDVIIIHTDHD---VIDYSILKDV--SPIIFDTRN 429
BSNT_04490___ 409 VLKKELIEACGLICTGVGRP 428
|.|::..:.|.::..
RBAM_031240 430 VCKEKSADNCRVVTL----- 444
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