Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04492 and RBAM_031220

See DNA alignment / Visit BSNT_04492 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence pep-align/BSNT_04492___ytcB.1.9828.seq
#    -bsequence pep-align/RBAM_031220.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04492___ytcB-RBAM_031220.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04492___ytcB-RBAM_031220.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04492___ytcB
# 2: RBAM_031220
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity:     100/341 (29.3%)
# Similarity:   144/341 (42.2%)
# Gaps:          57/341 (16.7%)
# Score: 319.0
# 
#
#=======================================

BSNT_04492___      1 MK-ILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKN     49
                     || |.:.|.||||||.|. .||:||.::.|                    
RBAM_031220        1 MKHIAIIGGAGFIGSELA-ALLQDKGYHTI--------------------     29

BSNT_04492___     50 LLQEKRFTFIKENLLT-----ADLAPLLEGVDVIFHLAAIPGVRSSWGNH     94
                     :..:|...|..|...|     ..|...|.|.|.:.||||:.||.|...|.
RBAM_031220       30 IADQKEPAFDTEYRQTDILDRTSLRESLRGADAVVHLAAMVGVDSCRSNE     79

BSNT_04492___     95 FHPYAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEKQG-KVSENTSL    143
                      ......|.:..:.:.|.|.|..|.|.:|:|:|.|:|:... ..:|.:..
RBAM_031220       80 -EDVIRVNFEGTKNVTEVCGELGISTLLFSSSSEVFGDSPDFPYTETSRK    128

BSNT_04492___    144 SPLSPYGVTKLTGEKLCHVYQQSFGIPIVILRFFTVYGPRQRPDMAFHRL    193
                     .|.|.||..||..|:... .|.|..:.|.::|:|.||||:||.|...::.
RBAM_031220      129 LPKSAYGKAKLQSEEYLR-EQASDELHIRVVRYFNVYGPKQREDFVINKF    177

BSNT_04492___    194 IKQHLQQKPLTIFGDGQQSRDFTYIGDCVKGITAVLGKPRLIGETVNIGG    243
                     .........|.::|||.|.|.|:||.|.|.|....|.....:.|..|||.
RBAM_031220      178 FSLAENGSELPLYGDGGQIRCFSYISDIVTGTYLALTHEGAVFEDFNIGN    227

BSNT_04492___    244 AERASVIKVVSLIEDISGRKATLHFSDKIAGEPRNTWAD---------IS    284
                     .:..::.::...:..:|||:...:...|: ||......|         |.
RBAM_031220      228 DQPITIKELAEKVNVLSGREKDNYLFKKL-GEDGVRGKDIEIFKRAPSIE    276

BSNT_04492___    285 KAKQLLHYNPATSLKDGLTNEITYLSSLYQGE---------    316
                     |||:||.|.|..||.:||        .:.:.|         
RBAM_031220      277 KAKRLLGYAPKVSLNEGL--------EIIKDERQKHKLSLS    309


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