Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01394 and RBAM_031160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence pep-align/BSNT_01394___yfiS.1.9828.seq
# -bsequence pep-align/RBAM_031160.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01394___yfiS-RBAM_031160.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01394___yfiS-RBAM_031160.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01394___yfiS
# 2: RBAM_031160
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 476
# Identity: 106/476 (22.3%)
# Similarity: 177/476 (37.2%)
# Gaps: 133/476 (27.9%)
# Score: 265.0
#
#
#=======================================
BSNT_01394___ 1 MEKPLFRNQKGLMT--------LLASQTISSLGD--WLHILAVLTLAAFQ 40
|| |..:|..||..| ||..|.:|.| :
RBAM_031160 1 ------------MTYRTPNYAKLWCAQVFSSAADGVWLIALPLLVL---E 35
BSNT_01394___ 41 LHASPLDMSLLMMSFALPVIVLGPVSGLLADRFDRKTIMFLSEIGRA--- 87
|..|.:.:.::.....:| :..|.::|.|.|.|.:|:|::|...|||
RBAM_031160 36 LTGSKILVGVISFIELVP-LTFGVLAGPLIDLFRKKSILYLCNTGRAAIM 84
BSNT_01394___ 88 --LTVISCVYVSELWQLYVLLCLQSCFSSLFSPAKNGKLKELAPEAHIQQ 135
|.|:|...:..:|...|.....|..|.||:|||...:..|..:.|:.|
RBAM_031160 85 ILLAVLSANDLLTVWIAGVCAFCLSLQSMLFAPAKVAIIPLLVRKQHLDQ 134
BSNT_01394___ 136 AVSASSIIDNSAKIFGPALGGMLIAAVSIHSVFYINAGAFLLSAVILFFL 185
|.|..:..|....|.|..:.|::|||:....:|.:|..|||:||..:
RBAM_031160 135 ATSLINTSDLIGLIVGKLISGIMIAAIPFGMLFALNGTAFLISAAFI--- 181
BSNT_01394___ 186 PKDAFLQKANTPQEKTSALASIKEGLQYLKRMPLLLIGLLTACVVLFVLQ 235
||::.:..|.||::....:|.|.:.||.. ...||:....||:.
RBAM_031160 182 ---AFIRISEQPNEKSNGTEDVKAGYRMLKGN----AAWLTSVGYFFVVN 224
BSNT_01394___ 236 IGDSQAIILIRSFSGAPPELAGWCMAVSGAGMLLTAAIAGRRRITSYFLY 285
:.::|...::...:|..|...:|.::
RBAM_031160 225 ------------------------LVIAGLISVMGPILAVERFQQNYSVW 250
BSNT_01394___ 286 FSA--GTFLLGLATGGVPF----------------LSGMGIAGIALFI-- 315
|:. ..|..|:..|.:.. |:..|:..:.||.
RBAM_031160 251 FAVMYSMFQAGMLLGNLAVFFKWNTKRLNRLYPRTLTAAGLLIMLLFFPL 300
BSNT_01394___ 316 -----FAFFIMGAAFGLVHIPFQILVQTTVPVDYSGRVFGAIQSATTLAS 360
..|.::|.....:.:...:..|.|||..|.||||..|.|...:..
RBAM_031160 301 HGFECIIFLVLGIIISYIDVQTVLYFQKTVPAAYFGRVFALIFSIVKMGE 350
BSNT_01394___ 361 ILGMAGGGMLAEWIGVSLAFLVCGCLLIL--------IGL-ITLVGKKVS 401
.|..| :..|.||:: :|| :|:|
RBAM_031160 351 PLSAA---------------VYTGLLLLMNADYIFAAVGLTLTIV----- 380
BSNT_01394___ 402 ESRRYLVTKSNKGAQG---------- 417
:.:....:|:|.
RBAM_031160 381 ----FAIFSVRQGSQRNTEKQADQSV 402
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