Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05126 and RBAM_031150

See DNA alignment / Visit BSNT_05126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:36
# Commandline: needle
#    -asequence pep-align/BSNT_05126___yvbK.1.9828.seq
#    -bsequence pep-align/RBAM_031150___yvbK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05126___yvbK-RBAM_031150___yvbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05126___yvbK-RBAM_031150___yvbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05126___yvbK
# 2: RBAM_031150___yvbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 153
# Identity:     118/153 (77.1%)
# Similarity:   136/153 (88.9%)
# Gaps:           0/153 ( 0.0%)
# Score: 631.0
# 
#
#=======================================

BSNT_05126___      1 MQHLTIQKATNFDQPLYELLLLADPSKEIVDDYLVRGECYTGYISGELAG     50
                     ||.|:|:||...|:.||||||||||||||||||||||||||.:.|.||||
RBAM_031150__      1 MQKLSIRKAAEPDEALYELLLLADPSKEIVDDYLVRGECYTAWTSDELAG     50

BSNT_05126___     51 VYVIITTRPQTVEIVNIAVKQTMQKQGIGKLLILDAIEKAKHMGAKVIEI    100
                     |||::.|||:|:||||||||:::|.:|.||.|:.||||||:..||..|||
RBAM_031150__     51 VYVLLQTRPKTIEIVNIAVKESLQNRGFGKQLVRDAIEKARQSGADTIEI    100

BSNT_05126___    101 GTGNSSIHQLSLYQKCGFRLQAIDHDFFIRHYDEEIFENGIQCRDMVRLY    150
                     |||||||||||||||||||:||:|||||||||||:|||||||||||:|||
RBAM_031150__    101 GTGNSSIHQLSLYQKCGFRIQAVDHDFFIRHYDEDIFENGIQCRDMIRLY    150

BSNT_05126___    151 LDL    153
                     |||
RBAM_031150__    151 LDL    153


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