Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05126 and RBAM_031150

See Amino acid alignment / Visit BSNT_05126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:36
# Commandline: needle
#    -asequence dna-align/BSNT_05126___yvbK.1.9828.seq
#    -bsequence dna-align/RBAM_031150___yvbK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05126___yvbK-RBAM_031150___yvbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05126___yvbK-RBAM_031150___yvbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05126___yvbK
# 2: RBAM_031150___yvbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity:     362/467 (77.5%)
# Similarity:   362/467 (77.5%)
# Gaps:          10/467 ( 2.1%)
# Score: 1339.5
# 
#
#=======================================

BSNT_05126___      1 ATGCAACACCTCACCATTCAAAAAGCAACAAACTTTGATCAACCGCTGTA     50
                     ||||||.|.||.|.|||.|.||||||..|..|....|||.||.|.|||||
RBAM_031150__      1 ATGCAAAAACTGAGCATCCGAAAAGCCGCGGAGCCGGATGAAGCACTGTA     50

BSNT_05126___     51 TGAGCTTCTGCTGCTCGCCGATCCGTCAAAAGAAATTGTTGATGACTA-C     99
                     |||.||..|||||||.|||||||||||||||||.|||||.|||||.|| |
RBAM_031150__     51 TGAACTATTGCTGCTGGCCGATCCGTCAAAAGAGATTGTCGATGATTATC    100

BSNT_05126___    100 TTGGTCAGAGGAGAATGCTACACAGGTTATATATCAGGCGAATTAGCTGG    149
                     || ||.||||||||||||||.||||.||..|..||||.|||..|.||.||
RBAM_031150__    101 TT-GTAAGAGGAGAATGCTATACAGCTTGGACGTCAGACGAGCTTGCAGG    149

BSNT_05126___    150 TGTATACGTGATCAT--CACAACTAGGCCACAAACGGTAGAAATCGTTAA    197
                     .||.||||| .|.||  || |||.|||||..|||||.||||||||||.||
RBAM_031150__    150 GGTTTACGT-TTTATTGCA-AACAAGGCCTAAAACGATAGAAATCGTAAA    197

BSNT_05126___    198 CATCGCAGTAAAACAAACAATGCAAAAACAGGGCATT-GGCAAGCTTCTT    246
                     ||||||.||||||.||.|..||| |.|||||||.||| ||.||.|..||.
RBAM_031150__    198 CATCGCGGTAAAAGAATCGCTGC-AGAACAGGGGATTCGGAAAACAGCTG    246

BSNT_05126___    247 ATCCTCGACGCCATTGAAAAAGCGAAACACAT-GGGAGCAAAGGTGATTG    295
                     .|.|..||.||||||||||||||||.||| || |||.||..|...|||||
RBAM_031150__    247 GTGCGGGATGCCATTGAAAAAGCGAGACA-ATCGGGGGCTGACACGATTG    295

BSNT_05126___    296 AAATAGGTACTGGAAATTCAAGCATCCATCAATTGTCTCTATATCAAAAA    345
                     ||||.||.||.||||||||.||.||.|||||..||||.||.|||||||||
RBAM_031150__    296 AAATCGGCACCGGAAATTCCAGTATTCATCAGCTGTCACTCTATCAAAAA    345

BSNT_05126___    346 TGCGGATTTCGCCTTCAAGCGATCGACCATGATTTTTTTATCAGACACTA    395
                     ||||||||.|||.||||.||..|||||||||||||||||||||||||.||
RBAM_031150__    346 TGCGGATTCCGCATTCAGGCTGTCGACCATGATTTTTTTATCAGACATTA    395

BSNT_05126___    396 CGACGAGGAGATTTTTGAAAACGGCATTCAATGCCGTGATATGGTGAGGC    445
                     .||.||.||.||||||||||||||||||||||||||.||||||.|..|||
RBAM_031150__    396 TGATGAAGACATTTTTGAAAACGGCATTCAATGCCGGGATATGATACGGC    445

BSNT_05126___    446 TTTATTTGGATCTCTGA    462
                     |||||||||||.|.|||
RBAM_031150__    446 TTTATTTGGATTTATGA    462


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