Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05118 and RBAM_031110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence pep-align/BSNT_05118___yvbF.1.9828.seq
# -bsequence pep-align/RBAM_031110___yvbF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05118___yvbF-RBAM_031110___yvbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05118___yvbF-RBAM_031110___yvbF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05118___yvbF
# 2: RBAM_031110___yvbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 149/185 (80.5%)
# Similarity: 171/185 (92.4%)
# Gaps: 0/185 ( 0.0%)
# Score: 792.0
#
#
#=======================================
BSNT_05118___ 1 MKKTALDIIEHAEEHLIEKIAENMHTFGMPSTVGRVLGIIYMNRKPMTLS 50
|:|.|||||.||||||||:|||||||||||:|:||||||||||||||||:
RBAM_031110__ 1 MEKNALDIIGHAEEHLIERIAENMHTFGMPATLGRVLGIIYMNRKPMTLN 50
BSNT_05118___ 51 ELSEATGMSKTRMSQVVREMIDANIAEKVFEKGVRKDLYDVEQDYYQTFI 100
||||||||||||||||||||.|.|:|||||||||||||||||:|||||||
RBAM_031110__ 51 ELSEATGMSKTRMSQVVREMTDVNLAEKVFEKGVRKDLYDVERDYYQTFI 100
BSNT_05118___ 101 SLFAANWTKVVSKNKVLYKKLNRELSDLLQRDGLTPEAEEKVNQLLNELK 150
|||.|||||.|||||:|||||||||::||:.:.|:|:.|||..|||:||.
RBAM_031110__ 101 SLFTANWTKAVSKNKMLYKKLNRELTELLESENLSPDIEEKARQLLDELT 150
BSNT_05118___ 151 EWLHYYDWLSRLIEFFESEEVFRYVPKTKESSSLK 185
:|||||||||||||||||||||::|||.::||:.:
RBAM_031110__ 151 DWLHYYDWLSRLIEFFESEEVFQHVPKIEKSSTRR 185
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