Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05115 and RBAM_031080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:35
# Commandline: needle
# -asequence pep-align/BSNT_05115___opuCC.1.9828.seq
# -bsequence pep-align/RBAM_031080___opuCC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05115___opuCC-RBAM_031080___opuCC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05115___opuCC-RBAM_031080___opuCC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05115___opuCC
# 2: RBAM_031080___opuCC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity: 257/305 (84.3%)
# Similarity: 284/305 (93.1%)
# Gaps: 0/305 ( 0.0%)
# Score: 1388.0
#
#
#=======================================
BSNT_05115___ 1 MKMTKIKWLGAFALVFVMLLGGCSLPGLGGASDDTIKIGAQSMTESEILA 50
||..:.:|:...||...:||||||||||.|||||||||||||||||||:|
RBAM_031080__ 1 MKRNQKRWMCVLALSAALLLGGCSLPGLSGASDDTIKIGAQSMTESEIIA 50
BSNT_05115___ 51 NMIAQLIEHDTDLNTALVKNLGSNYVQHQAMLGGDIDISATRYSGTDLTS 100
|||||:|||:|||||||:|||||||||.||||||:|||:|||||||||||
RBAM_031080__ 51 NMIAQMIEHNTDLNTALIKNLGSNYVQQQAMLGGEIDIAATRYSGTDLTS 100
BSNT_05115___ 101 TLGKEAEKDPKKALNIVQNEFQKRFSYKWFDSYGFDNTYAFTVTKKFAEN 150
|||.||||||||||:|||.||:|||.|||||||||:|||||||||:.||.
RBAM_031080__ 101 TLGMEAEKDPKKALSIVQKEFEKRFHYKWFDSYGFENTYAFTVTKELAEK 150
BSNT_05115___ 151 EHINTVSDLKKNASQYKLGVDNAWLKRKGDGYKGFVSTYGFEFGTTYPMQ 200
:|::.|||:||:|.|:|||||||||||||||||||..|||||||||||||
RBAM_031080__ 151 DHLDKVSDIKKHADQFKLGVDNAWLKRKGDGYKGFTDTYGFEFGTTYPMQ 200
BSNT_05115___ 201 IGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPPYDCSPVIP 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031080__ 201 IGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPPYDCSPVIP 250
BSNT_05115___ 251 EKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEK 300
:.|||:||||:|::|||||:||||||||||||||||||||||||||||||
RBAM_031080__ 251 DSVLKQHPELKGIVNKLIGKIDTETMQELNYEVDGKLKEPSVVAKEFLEK 300
BSNT_05115___ 301 HHYFD 305
||||:
RBAM_031080__ 301 HHYFE 305
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