Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05105 and RBAM_030960

See DNA alignment / Visit BSNT_05105 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05105.1.9828.seq
#    -bsequence pep-align/RBAM_030960___yvaP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05105-RBAM_030960___yvaP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05105-RBAM_030960___yvaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05105
# 2: RBAM_030960___yvaP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      96/108 (88.9%)
# Similarity:   100/108 (92.6%)
# Gaps:           3/108 ( 2.8%)
# Score: 488.0
# 
#
#=======================================

BSNT_05105         1 MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRV     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_030960__      1 MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGQQRFSEIEAALPNLSGRV     50

BSNT_05105        51 LSERLKELELEGVVKRDVIPETPVRIEYSLTDKGKALAPILGEISKWATE    100
                     |||||||||.|||:|||||||||||||||||:||.||||||.|||||::.
RBAM_030960__     51 LSERLKELETEGVIKRDVIPETPVRIEYSLTEKGCALAPILEEISKWSST    100

BSNT_05105       101 WIDPSFLD    108
                     |||||   
RBAM_030960__    101 WIDPS---    105


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