Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05104 and RBAM_030950

See DNA alignment / Visit BSNT_05104 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05104___yvaO.1.9828.seq
#    -bsequence pep-align/RBAM_030950___yvaO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05104___yvaO-RBAM_030950___yvaO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05104___yvaO-RBAM_030950___yvaO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05104___yvaO
# 2: RBAM_030950___yvaO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     103/143 (72.0%)
# Similarity:   124/143 (86.7%)
# Gaps:           4/143 ( 2.8%)
# Score: 543.0
# 
#
#=======================================

BSNT_05104___      1 MSPFGQQLRELRRARKLTVNQLAVYSGISSATISKIENGKRGTPKPATIK     50
                     |:.||:|||||||||||||||||||||:||||||:||||.||.||||||:
RBAM_030950__      1 MNTFGKQLRELRRARKLTVNQLAVYSGVSSATISRIENGHRGIPKPATIR     50

BSNT_05104___     51 KLAAVLKVPYENLMAAAGHIQAFPEEIREASESYQSVYEIYQTAVTRGAE    100
                     |||..||:|||.|||.||||:||.|||||.||||||:..||||||.||||
RBAM_030950__     51 KLADTLKIPYEELMARAGHIKAFQEEIRETSESYQSICAIYQTAVDRGAE    100

BSNT_05104___    101 HLPIFNSQKWEHLSKQDIENLSKYFDFLSSEAKKRASSS----    139
                     |||:|:|:||::.:|:|||::||||||:::|||||:..|    
RBAM_030950__    101 HLPLFDSKKWQYFTKEDIESVSKYFDFIAAEAKKRSPDSSSSF    143


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