Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05093 and RBAM_030910

See DNA alignment / Visit BSNT_05093 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05093___yvaK.1.9828.seq
#    -bsequence pep-align/RBAM_030910___yvaK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05093___yvaK-RBAM_030910___yvaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05093___yvaK-RBAM_030910___yvaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: RBAM_030910___yvaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     235/246 (95.5%)
# Similarity:   244/246 (99.2%)
# Gaps:           0/246 ( 0.0%)
# Score: 1284.0
# 
#
#=======================================

BSNT_05093___      1 MKVVTPKPFTFKGGDKAVLLLHGFTGNTADVRMLGRYLNERGYTCHAPQY     50
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_030910__      1 MKIVTPKPFTFKGGDKAVLLLHGFTGNTADVRMLGRYLNERGYTCHAPQY     50

BSNT_05093___     51 EGHGVPPEELVHTGPEDWWKNVMDGYEYLKSEGYESIAACGLSLGGVFSL    100
                     :|||||||||||||||||||:||||||||:|||||:||||||||||||||
RBAM_030910__     51 KGHGVPPEELVHTGPEDWWKDVMDGYEYLRSEGYENIAACGLSLGGVFSL    100

BSNT_05093___    101 KLGYTVPIKGIVPMCAPMHIKSEEVMYQGVLSYARNYKKFEGKSPEQIEE    150
                     |||||||||||||||||||||||||||:|||||||||||||||.|||||:
RBAM_030910__    101 KLGYTVPIKGIVPMCAPMHIKSEEVMYEGVLSYARNYKKFEGKQPEQIEK    150

BSNT_05093___    151 EMKEFEKTPMNTLKALQDLIADVRNNVDMIYSPTFVVQARHDHMINTESA    200
                     ||||||||||||||:||:||||||.|||||||||||||||||||||||||
RBAM_030910__    151 EMKEFEKTPMNTLKSLQELIADVRKNVDMIYSPTFVVQARHDHMINTESA    200

BSNT_05093___    201 NIIYNEVETDDKQLKWYEESGHVITLDKERDLVHQDVYEFLEKLDW    246
                     ||||||||||||||||||||||||||||||||||||||||||||||
RBAM_030910__    201 NIIYNEVETDDKQLKWYEESGHVITLDKERDLVHQDVYEFLEKLDW    246


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