Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05093 and RBAM_030910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05093___yvaK.1.9828.seq
# -bsequence dna-align/RBAM_030910___yvaK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05093___yvaK-RBAM_030910___yvaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05093___yvaK-RBAM_030910___yvaK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: RBAM_030910___yvaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 742
# Identity: 640/742 (86.3%)
# Similarity: 640/742 (86.3%)
# Gaps: 2/742 ( 0.3%)
# Score: 2780.0
#
#
#=======================================
BSNT_05093___ 1 ATGAAAGTTGTGACACCAAAACCATTTACATTTAAAGGCGGAGACAAAGC 50
||||||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_030910__ 1 ATGAAAATTGTGACACCAAAACCATTTACATTTAAAGGCGGAGACAAAGC 50
BSNT_05093___ 51 GGTGCTTTTGCTGCATGGCTTTACAGGAAATACAGCGGATGTAAGGATGC 100
|||||||.|||||||.||.|||||.||||||||.||.||.||.||.||||
RBAM_030910__ 51 GGTGCTTCTGCTGCACGGATTTACGGGAAATACGGCAGACGTCAGAATGC 100
BSNT_05093___ 101 TGGGACGATATTTGAATGAACGCGGCTATACGTGCCACGCGCCTCAATAT 150
|.||.||.||.||||||||.||||||||.||.||.|||||||||||||||
RBAM_030910__ 101 TCGGCCGCTACTTGAATGAGCGCGGCTACACTTGTCACGCGCCTCAATAT 150
BSNT_05093___ 151 GAAGGACATGGCGTCCCGCCTGAAGAACTTGTACATACGGGGCCCGAAGA 200
.||||.||.|||||.|||||.||||||||.||||||||||||||.|||||
RBAM_030910__ 151 AAAGGGCACGGCGTTCCGCCGGAAGAACTGGTACATACGGGGCCTGAAGA 200
BSNT_05093___ 201 CTGGTGGAAAAACGTAATGGATGGCTATGAATACTTAAAATCTGAAGGCT 250
.|||||||||.||||.|||||.||.||||||||.|||...||||||||||
RBAM_030910__ 201 TTGGTGGAAAGACGTCATGGACGGTTATGAATATTTACGGTCTGAAGGCT 250
BSNT_05093___ 251 ATGAGAGCATTGCTGCCTGCGGACTGTCGCTTGGCGGGGTTTTTTCGCTG 300
||||.|.||||||.||||||||||||||||||||||||||||||||..||
RBAM_030910__ 251 ATGAAAACATTGCGGCCTGCGGACTGTCGCTTGGCGGGGTTTTTTCATTG 300
BSNT_05093___ 301 AAATTGGGTTACACTGTACCCATAAAGGGAATTGTCCCAATGTGCGCACC 350
|||||||||||||||||||||||||||||||||||.||.|||||.||.||
RBAM_030910__ 301 AAATTGGGTTACACTGTACCCATAAAGGGAATTGTTCCTATGTGTGCGCC 350
BSNT_05093___ 351 GATGCATATTAAGAGTGAAGAGGTTATGTATCAAGGCGTTCTTTCATACG 400
||||||.|||||.|||||||||||||||||..||||.||||||||.||||
RBAM_030910__ 351 GATGCACATTAAAAGTGAAGAGGTTATGTACGAAGGAGTTCTTTCCTACG 400
BSNT_05093___ 401 CTCGCAATTACAAAAAGTTTGAGGGGAAA-AGCCCGGAGCAAATTGAAGA 449
|.||||||||.|||||.||.||.||.||| || ||||||||.||||||.|
RBAM_030910__ 401 CGCGCAATTATAAAAAATTCGAAGGAAAACAG-CCGGAGCAGATTGAAAA 449
BSNT_05093___ 450 GGAAATGAAAGAATTCGAAAAAACGCCGATGAATACCCTCAAGGCACTGC 499
|||||||||.||.||.||||||||.|||||||||||.|||||..|.||.|
RBAM_030910__ 450 GGAAATGAAGGAGTTTGAAAAAACACCGATGAATACGCTCAAATCGCTTC 499
BSNT_05093___ 500 AAGACTTAATTGCTGATGTGCGGAATAATGTCGATATGATTTATTCACCG 549
|.||..|.|||||.||||||||.||.||.|||||.|||||.|||||.|||
RBAM_030910__ 500 AGGAGCTGATTGCCGATGTGCGCAAAAACGTCGACATGATCTATTCCCCG 549
BSNT_05093___ 550 ACATTTGTGGTGCAGGCCCGTCATGACCACATGATTAATACCGAAAGCGC 599
|||||||||||.|||||.||.||||||||.|||||||||||.|||||.||
RBAM_030910__ 550 ACATTTGTGGTTCAGGCACGGCATGACCATATGATTAATACAGAAAGTGC 599
BSNT_05093___ 600 CAATATTATTTACAACGAAGTGGAAACTGATGATAAACAGCTGAAATGGT 649
.||.||.|||||.|||||.||||||||.||.||.||||||||||||||||
RBAM_030910__ 600 GAACATCATTTATAACGAGGTGGAAACGGACGACAAACAGCTGAAATGGT 649
BSNT_05093___ 650 ACGAGGAATCAGGGCATGTCATTACACTCGACAAAGAACGTGACCTCGTC 699
|.||.||||||||.|||||||||||.|||||.||||||||.||||||||.
RBAM_030910__ 650 ATGAAGAATCAGGCCATGTCATTACGCTCGATAAAGAACGGGACCTCGTT 699
BSNT_05093___ 700 CATCAGGATGTGTATGAATTTTTAGAGAAGCTCGATTGGTAA 741
||||||||||||||.||||||||||||||.||||||||||||
RBAM_030910__ 700 CATCAGGATGTGTACGAATTTTTAGAGAAACTCGATTGGTAA 741
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