Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05092 and RBAM_030900

See DNA alignment / Visit BSNT_05092 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05092___rnrrnr.1.9828.seq
#    -bsequence pep-align/RBAM_030900___rnr.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05092___rnrrnr-RBAM_030900___rnr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05092___rnrrnr-RBAM_030900___rnr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05092___rnrrnr
# 2: RBAM_030900___rnr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 779
# Identity:     720/779 (92.4%)
# Similarity:   755/779 (96.9%)
# Gaps:           2/779 ( 0.3%)
# Score: 3727.0
# 
#
#=======================================

BSNT_05092___      1 MEKEAFMEKLLSFMKEEAYKPLTVQELEEMLNITEAEEFKELVKALVALE     50
                     |||||||::||:||||||||||||||||||||||||:|||||||||||||
RBAM_030900__      1 MEKEAFMDRLLAFMKEEAYKPLTVQELEEMLNITEADEFKELVKALVALE     50

BSNT_05092___     51 EKGLIVRTRSDRYGIPEKMNLIKGKISAHAKGFAFLLPEDTSLSDVFIPP    100
                     |.|.||||||:|||:||||||:||||||||||||||||||||||||||||
RBAM_030900__     51 ETGQIVRTRSNRYGLPEKMNLVKGKISAHAKGFAFLLPEDTSLSDVFIPP    100

BSNT_05092___    101 NELNTAMNGDIVMVRLNSQSSGSRQEGTVIRILERAIQRVVGTYTETRNF    150
                     |||||||||||||||||||||||||||||||||||:|.|||||||||::|
RBAM_030900__    101 NELNTAMNGDIVMVRLNSQSSGSRQEGTVIRILERSIDRVVGTYTETKSF    150

BSNT_05092___    151 GFVIPDDKKITSDIFIPKNGKNGAAEGHKVVVKLTSYPEGRMNAEGEVET    200
                     ||||||||||||||||||:..||||||||||||||||||||||||||:..
RBAM_030900__    151 GFVIPDDKKITSDIFIPKHANNGAAEGHKVVVKLTSYPEGRMNAEGEIVE    200

BSNT_05092___    201 ILGHKNDPGIDILSVIHKHGLPGEFPADAMEQASSTPDTIDEKDLKDRRD    250
                     ||||||||||||||:||||||||:|||:|||||:||||||||||:|||||
RBAM_030900__    201 ILGHKNDPGIDILSIIHKHGLPGDFPAEAMEQATSTPDTIDEKDIKDRRD    250

BSNT_05092___    251 LRDQVIVTIDGADAKDLDDAVTVTKLDDGSYKLGVHIADVSHYVTENSPI    300
                     |||||||||||||||||||||||||||:||||||||||||||||||||||
RBAM_030900__    251 LRDQVIVTIDGADAKDLDDAVTVTKLDNGSYKLGVHIADVSHYVTENSPI    300

BSNT_05092___    301 DKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQ    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_030900__    301 DKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINQQ    350

BSNT_05092___    351 GQVTEHEIFQSVIKTTERMTYSDVNKILVDDDEELKQKYEPLVPMFKDME    400
                     |||||||||||||||||||||||||:||.:||.|||::||||||||||||
RBAM_030900__    351 GQVTEHEIFQSVIKTTERMTYSDVNRILTEDDAELKERYEPLVPMFKDME    400

BSNT_05092___    401 RLAQILRDKRMDRGAVDFDFKEAKVLVDDEGAVKDVVIRERSVAEKLIEE    450
                     |||:|||.||||||||||||||||||||:|||||||||||||||||||||
RBAM_030900__    401 RLAEILRAKRMDRGAVDFDFKEAKVLVDEEGAVKDVVIRERSVAEKLIEE    450

BSNT_05092___    451 FMLVANETVAEHFHWMNVPFIYRIHEEPNAEKLQKFLEFVTTFGYVVKGT    500
                     |||||||||||||||||||||||||||||||||||||||||||||:|||.
RBAM_030900__    451 FMLVANETVAEHFHWMNVPFIYRIHEEPNAEKLQKFLEFVTTFGYIVKGK    500

BSNT_05092___    501 AGNIHPRALQSILDAVRDRPEETVISTVMLRSMKQAKYDPQSLGHFGLST    550
                     ||:|||||||||||.|||||||||||||||||||||||||||||||||:|
RBAM_030900__    501 AGDIHPRALQSILDEVRDRPEETVISTVMLRSMKQAKYDPQSLGHFGLAT    550

BSNT_05092___    551 EFYTHFTSPIRRYPDLIVHRLIRTYLINGKVDEATQEKWAERLPDIAEHT    600
                     |||||||||||||||||||||||||||||:.|||||||||||||:||:||
RBAM_030900__    551 EFYTHFTSPIRRYPDLIVHRLIRTYLINGQSDEATQEKWAERLPEIADHT    600

BSNT_05092___    601 SSMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPNT    650
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_030900__    601 STMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPNT    650

BSNT_05092___    651 IEGLVHVSFMTDDYYRFDEQHFAMIGERTGNVFRIGDEITVKVVDVNKDE    700
                     ||||||||||||||||||||||||||||||||:|||||||||||||||||
RBAM_030900__    651 IEGLVHVSFMTDDYYRFDEQHFAMIGERTGNVYRIGDEITVKVVDVNKDE    700

BSNT_05092___    701 RNIDFEIVGMKGTPRRPRELDSSRSRKRGKPARKRVQSTNTPVSPAPSEE    750
                     ||||||||||||| |||||....| ||||:||||||.::|||.||..|||
RBAM_030900__    701 RNIDFEIVGMKGT-RRPRETTGDR-RKRGRPARKRVLNSNTPASPPKSEE    748

BSNT_05092___    751 KGEWFTKPKKKKKKRGFQNAPKQKRKKKK    779
                     |||||||||||||||||||||||||||||
RBAM_030900__    749 KGEWFTKPKKKKKKRGFQNAPKQKRKKKK    777


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